- Probe CUST_33598_PI390587928
- Source Contig U35_7014
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_33598_PI390587928 | Hv_44K_v2 | ATTGTTAGTGAATATGCTGTGACTGGAAATGATGCTGGCCGAGGAACATTAGTAGCTGCT | 1037 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_64388.11 | 2402 | 2e-24 | 1575 - 1634 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.8 | 2976 | 2e-24 | 1602 - 1661 | 100 | 60 / 60 | plus | ABC19630 ABC24807 |
| MLOC | MLOC_64388.1 | 2432 | 2e-24 | 1816 - 1875 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.2 | 2336 | 2e-24 | 1807 - 1866 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.6 | 2577 | 2e-24 | 1786 - 1845 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.12 | 2445 | 2e-24 | 1639 - 1698 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.7 | 2478 | 2e-24 | 1675 - 1734 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.10 | 2366 | 2e-24 | 1672 - 1731 | 100 | 60 / 60 | plus | ABC24807 |
| MLOC | MLOC_64388.4 | 2764 | 2e-24 | 1687 - 1746 | 100 | 60 / 60 | plus | ABC19630 ABC24807 |
| MLOC | MLOC_64388.14 | 4073 | 2e-24 | 1644 - 1703 | 100 | 60 / 60 | plus | ABC19630 ABC24807 |
| MLOC | MLOC_64388.13 | 4065 | 2e-24 | 1636 - 1695 | 100 | 60 / 60 | plus | ABC19630 ABC24807 |
| MLOC | MLOC_64388.3 | 2535 | 2e-24 | 1696 - 1755 | 100 | 60 / 60 | plus | ABC24807 |
| JLOC1 | JLOC1_42278.4 | 4071 | 8e-25 | 1589 - 1648 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_42278.3 | 3003 | 8e-25 | 1589 - 1648 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_42278.2 | 4087 | 8e-25 | 1605 - 1664 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_42278.1 | 3019 | 8e-25 | 1605 - 1664 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC14996 | 1097 | 3e-25 | 1038 - 1097 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_7014 | 1097 | 3e-25 | 1038 - 1097 | 100 | 60 / 60 | plus |
Contig Sequence (1097 bp)
>U35_7014 1097 Hv_44K_v2 GACTAATCCGATCGCACTTCGGATGGAAGTACTGTTGTCAATCTAATGGAAATGATGTCT GCCCACCAGGAGGTGTTGGCATTTATAATCCTGGTTTCTGGGGCATGAATATTGAGGAAG CAAAGGTTTATAAAGTCAGCATGTACATCAGGTCATCAGACTCCATGGATCTAACAGTTT CCTTGACAAGCTCAGATGGTCTTCAGAATCTAGCTGCTTATACCATCACGGCTGATAAGG AAGAGTTTAAAGAGTGGACGAAGGTTGAGTTTGATCTGCAATCAAGTGGAAGAAATTATA ACTCAAGGCTTCAGCTTACGACCACAAAAAGTGGCATAGTTTGGTTTGATCAAGTATCAC TTATGCCATCTGATACTTACATGGGGCATGGTTATCGTAAAGATCTTGCGTCTATGCTGG CAAATCTAAAGCCTAAATTTTTGAAATTCCCAGGTGGAAACTATGTCATGGGAAACTATC TGTTAAATGCATTTCGCTGGAGTGAAACTGTTGGACCCTGGGAGGAGAGACCTGGTCATT TTAATGATGTTTGGGGCTACTGGACTGATGATGGACTTGGATTCTTTGAGTTCCTTCAAT TAGCAGAAGACCTTGGTGCTTGCCCAGTTTGGGTGGTCAATGATGGGGCTAGCCGATATG AACAAGTATCATCTGCCACAATAGCTGCTTTTGTAAAGGATGTTGTTGACAGTATTGAGT TTGCAAGGGGAGACCCTGGGACTTCATGGGGTTCAGTTCGTGCAGCAATGGGACACCCAG AGCCCTTTCAGCTTAATTATATTTCTATGGGAAATCAGGAATGCTCAATGCACTACTATA AAGAGAATTACCGCAAGTTCTACTCTGCAATAAAAGCATCCTACCCAGATATCAAAATCA TATCCAGCTGTGATAGATCTACCATTTCACCAGTCGCACCTGCTGATCTGTATGATGTTC ATGTCTATACCTCATCTGGTGATATGTTTTCCAAATCTAGCATGTTTGACAGCACACGCC GAGGTGGACCAAAGGCAATTGTTAGTGAATATGCTGTGACTGGAAATGATGCTGGCCGAG GAACATTAGTAGCTGCT
Homology of Contig U35_7014 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os03g20420.3 | 518 | 0.0 | protein|alpha-N-arabinofuranosidase A, putative, expressed |
| Brachypodium v1_2 | Bradi1g63990.2 | 676 | 0.0 | |
| Arabidopsis v10 | AT3G10740.1 | 678 | 1e-152 | | Symbols: ASD1, ARAF1, ARAF, ATASD1 | alpha-L-arabinofuranosidase 1 | chr3:3361031-3364573 REVERSE LENGTH=678 |