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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33546_PI390587928Hv_44K_v2GTAGAATGTTGCATAGCTTTGCTAGAGGCACTATTAGTTTTTAGTTGGTATATCTGTGTA814GeneList: lightcyan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.9281.5022.3021.8790.6090.706
Raw 128.844329.175432.204564.52863.66480.729



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_57704.142482e-244136 - 419510060 / 60plus ABC08681 ABC18066
JLOC1JLOC1_37434.326558e-252565 - 262410060 / 60plus
JLOC1JLOC1_37434.229528e-252862 - 292110060 / 60plus
Harvest21ABC180669543e-25815 - 87410060 / 60plusABC18066
Harvest35U35_30709543e-25815 - 87410060 / 60plus



Contig Sequence (954 bp)

>U35_3070 954 Hv_44K_v2
TCATTCCCCACTGATAGGGTAAGCCCAGATTTCTCCTCTCAGGTACAACAGCAACAAAAT
GTTGCTTCTGGTTCTGCCCAAGCTCCTGACGAGGTGGATAAGAACAAGAAGTACCAGGCG
ACCCTCCAGTTTGCGCACAATTTATTGCTTCAGCTACAACGTGGATCTGGAAATCAATCT
TGATGATGAGTACTGCTTCAGGTAAGCTCACCTCTGCACTTAAGTGTTATTTTGCTTGCT
TTATCTTTTCTGCTAAAATTATGGATGTAGTGAAATAGATTTAGCTAACTTCAGAGGTTC
CTAGCCAATTTTGCATGGGGAATTCCAGGAACAAGTTTCTAGGGACATGGTTTGAAGGAA
TAATAATTGACAAAAGTTACAATTTTGTCTGCCACCTGAAATACTGATAACTGCTAATCA
TCTTTGATAGTGCTAACATAACCATAAAGCTTGGAATGTTAGACGGAATTCATGCCTAGC
AAATTCTTATTGTGCTAATAGACTGAAACAAAACCCAACAGCTATCCTGTAATTAATGAT
TCGTGGTAATATATTAGGGCAGGTCTCGCTGATGAATGTTACATTATTTGTGGGGTGCAT
ATCGTGTAGGATCAAGCTGATCAGAACCAGTGGCTTAGATACTAAAGTTTATCTAACAAA
TTCACACATGTATCCTTTTCATTAGCTAGATCTTTTATGTGCATTATCTGTTGATATTTT
TTGCTTGCATGATAAGTTGATATCTGCGTATTCTATCTTGATTGAGTTCTGGACCTCTGA
TCTACATAGGTTAATTGCAGTAGCTAAAGGCATGGTAGAATGTTGCATAGCTTTGCTAGA
GGCACTATTAGTTTTTAGTTGGTATATCTGTGTATAAACATCTTTCATGTAATGGCCTTA
TAACTGGTGATTTGAAACAAAGCGAAAACCATTCTTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_3070 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None