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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33443_PI390587928Hv_44K_v2CAGGAAAAAATAAAGCTAAGAATTTTGGGATGAAGTGTCGCCTTCTCAAGGCGTCGCTAG653GeneList: darkgreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.7640.9691.6051.4030.4010.676
Raw 14.23928.08944.08952.8585.16511.410



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_48913.17592e-24420 - 47910060 / 60plus None
Harvest35U35_349678193e-25654 - 71310060 / 60plus



Contig Sequence (819 bp)

>U35_34967 819 Hv_44K_v2
GGCGAATTGGGCCCTTTCGAAGATGCTCGAGCGGCCGCTGCATTTCCTGCTCGTCATCGT
CATACTAATGAAAGCACAAGGAAGCGTGTTATATTTTACGCACTTGGAGAGTATCTGTTG
CTTATATTGGCAAGCGGGCTTCAAGTTCTGTATATCCGACAACTATTCAGCAAGTCGGTT
GGCTATAACCGGGTTTGACCAATTTCGGTTGTAGCATAGTGTTTTTTCACCTTTGTTCTA
CAGGAATTAGAGTTGTTTTGGTCAGTTGAGAGAAGGGCATCCTTCTGTAGCATCTTTTCT
TAAGTTACTATTTGAAAGGATTTGATCCATTCTCAAAAGCAGGTTTAAATTTCTGTGAAT
GATGGATATGGTTCGTTCGTTTAGAAGTACTTCAGATGGATTCACAACATTGGTTATTTA
TAAGACGTCATCTTGAAAAGATGTTGCTGAGCGGCCGCTATGAAATTTCCCGGATAATTA
TTTTGGAATATATGAAAAATATTTGGAAGGAGTAATTACCAAAGAGGAGCCTCGATGGGC
CCACAAGGCAAGGTGCATGCCCTCCCCCTTCCTCACACGACGTGCCCTAGTAACTTGTTG
GGCCCACATGGGTTCTCCGAAGCCCATCTTCTGCTATATGAATCCATTTTCACCAGGAAA
AAATAAAGCTAAGAATTTTGGGATGAAGTGTCGCCTTCTCAAGGCGTCGCTAGGGCATGG
GCATTTTTGTTCTCCGGCGGAACGATTTTGACGGGGAAACTTCCACCCAGGAGGGGAAAG
TCAATGCCATCGACATCAAGAGCGGTCGTCTCATCATGG



Homology of Contig U35_34967 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None