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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33286_PI390587928Hv_44K_v2TTTTGCCATTTCCTGTAATCCTGCTGAATTGATGGCTTTGTTTTGATATTACATTGTTGC770GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.4071.4211.0980.9850.4350.366
Raw 4055.6036541.2804398.9406162.717963.834877.657



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
JLOC1JLOC1_12221.218628e-251707 - 176610060 / 60plus
JLOC1JLOC1_12221.113868e-251231 - 129010060 / 60plus
Harvest35U35_210958333e-25771 - 83010060 / 60plus



Contig Sequence (833 bp)

>U35_21095 833 Hv_44K_v2
TATAGGGCGAATTGGGCCCTTTCGATAATGCTCGAGCGGCCGCTGGGGTGCCAGCGTGGA
CGCTTTGAAATGTGCGAAGCAAACTTGTGATAGAGCATGTGATTCCACACTCGCACGACT
GATGGCATATATAAATTGTGTGGCTTCTTGCAGCTATGGCGACCGCTTGGCAAGCGACGA
CAGTAGGGGTTCATCGACATCATCAGCACCGGTCTCCGCTCTCGTGCGTCCTTCTTCCCT
CCACCGCCCCTTCACCTTCACCGGAGCTTGATTAGATGCTAGCTTTTGTTTTTTTTGGGA
TGTGTTGTTGTGTGCCTCCAGCTGGACTTATTTTCGTTTTTGACTTCTTTTGTAAAGTGA
TCGGATGCTTGGTGTGGTTGCTATATAATATAAAATGGGAGCGGCCGCTGGGGAACACAT
GGGGCAATCCGCCAGCACGATTGGCCTCAAGTCGGTCGCTGTGAAAGTGAAAGGATGTTC
CTTTTACAGGAAGAAGAAGAAAGTGCTCTTCAGCTTTGCGGACCGTTCCCGGCGTGAAAG
AGTGAGGAGCTCTTCTCCTAAATAAGGTTAATAATAGCCCTGCAGGAACAAGCACGAAGA
CGAAGAGTGAAAATCAAATAGCCCTGCAGGAACAAGCAAGAAGAGTGAAAATCAATATCA
TGTCCGAAGGAGAAGCAGAAAAGAGCGGCTGGTTCCCTAATAACACCATGAGCCTACAAG
TATTTAAAAAGATTAGACAGTCTTAGATCAGCTCTTGTAAGACATGACTATTTTGCCATT
TCCTGTAATCCTGCTGAATTGATGGCTTTGTTTTGATATTACATTGTTGCAGA



Homology of Contig U35_21095 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None