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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33252_PI390587928Hv_44K_v2ATAGGTACATCACAAACCTTGTATTACTGGAGGACTCCTTGCTGAGGCTCTTGCAAAAAG512GeneList: cyan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.7801.1391.3150.7970.6110.545
Raw 994.701866.4491007.876829.498257.589253.399



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_79145723e-25513 - 57210060 / 60plus



Contig Sequence (572 bp)

>U35_7914 572 Hv_44K_v2
AGCCCTCTCCGCCTTGATCTACAGTGCTTCCGCGCCTCCGCCCCCCACGCCCTCCGCCGC
TCACGCCTCCATTCTCCGCGAGATCCGAGCCTACTCCGCTCCGCCGACGCAACTCAAGGC
AAGAGCTTTGAATCTAGTTGAAGGAAAACAAACAAACAACAGCCATGGCATCTCGTTTTT
GGGGACAGGGAGGCAGTGACTCTGAGGAGGAGGTGGACGAGATTGAGTCAGAACAAGGGA
GCGATAGTGAAAAATCAGAAGCTGGTGATGGGGGTCGTGATGTGTCCAAGAACCGCTATT
TGCATAGAGAGGACAGTGACGACTCTGATACTGAGAGCCATCGTGTGATTCGCTCGTTGA
AGGACAAGCGCAATGATGAGATGAAAGCTACTGCCGACCAGATGCGCAATGCAATGAAGA
TCAATGACTGGCTTAGCTTGCAAGAGAGCTTTGACAAGCTCAATAAGCAGCTTGAGAAGG
TTGTTCGTGTCAATGAATCTACCAAATTCCAAATAGGTACATCACAAACCTTGTATTACT
GGAGGACTCCTTGCTGAGGCTCTTGCAAAAAG



Homology of Contig U35_7914 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None