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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33136_PI390587928Hv_44K_v2TCTATGTTTTGCTGTTCTTGGACTATGTGGGACGAGATGTGATGTTTGCATACCACTGAG20GeneList: grey60
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 10.7787.5732.6950.5250.0880.148
Raw 950.9421149.682333.833107.3905.33111.782



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_385796553e-2521 - 8010060 / 60minus



Contig Sequence (655 bp)

>U35_38579 655 Hv_44K_v2
TTTTTTTTTTTTTTTTTAACCTCAGTGGTATGCAAACATCACATCTCGTCCCACATAGTC
CAAGAACAGCAAAACATAGACGCGATCACGTTACATGCAACAGGCAACAAAACCTTTGAT
CAATGGTTTTACAGCCACACTGGCAACATCGCGACACTAACAACACAGACGCTAAGACTG
GACGAACACAATACTTAAGCTGGTAAGATAACTAATGGCGGGAGTACCATCTGCATTATT
CCATCTCCTGAGAGATCGGCCCTAGCTAGCTCGGCAGCAACACACACCGCAGGAGGATCA
ACGACGCCGTACGTACGTGGCTCTTCTTGGCCTGCTCGCACAACTCTTCTCGACCGCTTT
TCTCGGCTCCCAGCTTGACGGAGTGGTGAGACCTTGGGGGCTGGCTTGTACGCCGGCGGC
GAGGGCTTAGGCTGGGTTGGTGGTTTGTACGTGGGAGGTGCAGGCTTGGGCGTAGGGTGG
TACGCCGGAGGAGATGGCTTCGGCGGTGAGACCTTGGGAGCAGGCTTGTACGCCGGCGGT
GAGACCTTGGGGGCTGGCTTGGCGTGGTGGTGGTGGTGAGGGGGCTTGTGCCCCTTGGGT
GGCTTCTCGTGCTTGGGGGGTGGGGTGACCGGCGTCGGGGAAGGGGGGTGCCCGC



Homology of Contig U35_38579 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None