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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33115_PI390587928Hv_44K_v2TGGAGAGGATGGTGATGAGGCTCATGAGGAATAAGTCTCTTCTCGCCGGAGCCTCTAGCC54GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36624324472e-24101 - 16010060 / 60plus ABC05574 ABC45371 ABC45603 ABC47595
MLOCMLOC_69242.257972e-24159 - 21810060 / 60plus ABC45603 ABC47595
MLOCMLOC_69243.12942e-2490 - 14910060 / 60plus None
MLOCMLOC_69242.113332e-24165 - 22410060 / 60plus ABC47595
MLOCMLOC_69242.349612e-2490 - 14910060 / 60plus ABC45603 ABC47595
JLOC1JLOC1_45867.116418e-25180 - 23910060 / 60plus
Harvest21ABC0130514183e-2570 - 12910060 / 60plus
Harvest21ABC012964643e-2577 - 13610060 / 60plus
Harvest21ABC0129514183e-2581 - 14010060 / 60plus
Harvest35U35_385974493e-2555 - 11410060 / 60plus
Harvest35U35_1470714243e-2594 - 15310060 / 60plus
Harvest35U35_147016553e-2556 - 11510060 / 60plus



Contig Sequence (449 bp)

>U35_38597 449 Hv_44K_v2
AACCGTCGCACCACTGGCAGCCGAGAGCTAGAGCCCCAAACCAAAGGAGAGAGATGGAGA
GGATGGTGATGAGGCTCATGAGGAATAAGTCTCTTCTCGCCGGAGCCTCTAGCCGCGGCG
GCGGAGGACTAGCCTCCTCCTCCATTGTCGACTCTTCCCCCTTCTCCACCCTGCAGCAGC
AGCAGCAGGAAGACCCCGGTGTGCTCAACATCAGGGACACCGCCGCCCACCTCATCGGNG
CGGNACGCCGCTGGTGTACCTGAACAAGGTGACAGAGGGGTGCGGCGCACGGGTCGCCGC
CAAGCTCGAGTTCCTCCAGCCCTCCTTCAGCGTCAAGGACAGACGACGCTGATCGAGCCT
ACGTCCGGCAACCATGGGCATCGGCCCTGGCGTTCATGGCGGCGCTCAAAGGGTACGAGC
TCGTGCTGACGATGCCGTCCTACACCAGC



Homology of Contig U35_38597 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None