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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_33105_PI390587928Hv_44K_v2GCAGACTCAGACCTTGGAAGATCGTGATTCTAAACATACTGTATATTGCTATTCAAAAAA504GeneList: darkred
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.0981.6031.8901.2280.3500.296
Raw 257.324582.972617.509605.14363.35158.316



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK36952314463e-211393 - 144610054 / 54plus None
Harvest35U35_95085743e-25505 - 56410060 / 60plus



Contig Sequence (574 bp)

>U35_9508 574 Hv_44K_v2
GCGCGCGCTTCGGCGACGCGGCGGGCGTCATGGCGTCCTTCCTCGTCTCCGGGATCATGC
ACGAGGTGATGTTCTACTACATCATGTGGCAGCCGCCCAGCGGCGACGTGACCGCCTTCT
TCGTCCTGCACGGGGCGTGCACCGCGGCGGAGGGGTGGTGGGCACGGCACGCCGGGTGGT
GGCGCCCGCCGCGGGCGGTGGCGGTGCCGATCACGCTCGCGTTCGTGGGTGGGACGGGGA
TCTGGATCTTCTTCCCGGCCATGGTTAGGGGCGGCCTGGACGAGCTTGTGCTGCAGGAGT
GCCAGGGCTTGGTGGTGGCCATGGAGCAGGCAGGCCGTTGGCTCGCCGGCGGCGGCGCCG
CCGGTCCCATTCTTTCCACCCGCTGACCAGCAGAAAACATGTGATGTGACGAGAGATTTC
TTTTTTTATGGGTGTGACGAGAGATTGAACGTGTGCCGTAGGATAGGAAGGTGTGACGAG
GGAATACTTGTGATGTCGACTGTGGCAGACTCAGACCTTGGAAGATCGTGATTCTAAACA
TACTGTATATTGCTATTCAAAAAAAAAAAAAAAA



Homology of Contig U35_9508 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os02g25700.13532e-65protein|O-acyltransferase, putative, expressed
Brachypodium v1_2Bradi4g23490.13491e-66
Arabidopsis v10None