- Probe CUST_33002_PI390587928
- Source Contig U35_42646
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_33002_PI390587928 | Hv_44K_v2 | AACCTCAAGTCATGTGTTGTTGATTGCTGCATTGGTATCCCGGTGTATTTCACTGACCTG | 31 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_26505.1 | 2973 | 3e-21 | 553 - 612 | 97 | 58 / 60 | plus | ABC02819 ABC02820 |
| MLOC | MLOC_26505.2 | 3031 | 3e-21 | 2277 - 2336 | 97 | 58 / 60 | minus | ABC02819 ABC02820 |
| JLOC1 | JLOC1_18002.1 | 3934 | 2e-21 | 694 - 753 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC38438 | 176 | 3e-25 | 32 - 91 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_42646 | 176 | 3e-25 | 32 - 91 | 100 | 60 / 60 | plus |
Contig Sequence (176 bp)
>U35_42646 176 Hv_44K_v2 TTGGGGTAATCTGAAGGCCATAGCTGAGGATAACCTCAAGTCATGTGTTGTTGATTGCTG CATTGGTATCCCGGTGTATTTCACTGACCTGCAGCGTAGGTCGGTTCTCGATGCTGCCAC TATTGCTGGTCTCCGCCCGTTGCGCCTGTTCCATGAGACCACTGCTACTGCATTGG
Homology of Contig U35_42646 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |