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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32939_PI390587928Hv_44K_v2AATCAAACGGTTTAAACAAGCTCTGGCCTCTGGTGAACTCAGCAAGATGATTGAACCATG545GeneList: darkorange
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1580.7691.2421.2290.7560.894
Raw 20.15718.70328.79342.4079.57412.449



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_251046323e-25546 - 60510060 / 60plus



Contig Sequence (632 bp)

>U35_25104 632 Hv_44K_v2
GTTCGAGGCGTGCCTTCCAGTCTCAGCTTCGAGAAAGCTCGTCGCCGCACGCCGCCCCGC
CGGGAAGGAATCGCCCCCAAAGCGCCCGCGTACACCGGAGGATCAGCGCACGAGAAGGGC
GGGAGCAGCCACCACTCGCCGCCGATGGAGAGGGTCGTGGTGGTCTCCGAGGACGCCGCC
GCCTCGGTCTCCTCCGCCCCGTCCTCCTCCTTCGCGGAAACCAGAGTCATCTGCCGCGTA
TGTCAGAAGCAGTTCGCGCAGTACACCTGTCCACGCTGCAACTCCCGCTATTGCTCTCTT
ACATGCTACAAGGGGCATAGTGTGCAATGCACCGAGTCTTTTATGCGTGAGAATGTTACG
GAGGAGCATAAGCAGATTCAGCCTGAAGATGAATCAAAAAGGAAGATGCTTGATATACTC
AGAAGGTTCCACTTGGAAGAAGAAATGGAGTCCGATGGTGAAGATGAGTCAATGTTGTCA
GAGGAGCTTATTCAGAAAGCCATCTCTGGTGATGAAATCAAGCTTGAGGACCTCTCTGAT
GATGAAATCAAACGGTTTAAACAAGCTCTGGCCTCTGGTGAACTCAGCAAGATGATTGAA
CCATGGACTCCGGGATGGAGCGGCCGCTCGAG



Homology of Contig U35_25104 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os10g37640.14216e-65protein|HIT zinc finger domain containing protein, expressed
Brachypodium v1_2Bradi3g31377.24112e-69
Arabidopsis v10None