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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32578_PI390587928Hv_44K_v2TTTCTCTTTTGGCAGCATCTGAGCGTGGGGATTTCAGGATGATTGTTGCCTCGATAAGAA446GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_61671.125642e-24574 - 63310060 / 60plus ABC08814
JLOC1JLOC1_40302.1332758e-25423 - 48210060 / 60plus
JLOC1JLOC1_40302.1033678e-25560 - 61910060 / 60plus
JLOC1JLOC1_40302.634158e-25563 - 62210060 / 60plus
JLOC1JLOC1_40302.436128e-25435 - 49410060 / 60plus
JLOC1JLOC1_40302.236128e-25435 - 49410060 / 60plus
JLOC1JLOC1_40302.133828e-25575 - 63410060 / 60plus
JLOC1JLOC1_40302.1240256e-21555 - 60710053 / 53plus
JLOC1JLOC1_40302.1139436e-21559 - 61110053 / 53plus
JLOC1JLOC1_40302.736716e-21562 - 61410053 / 53plus
Harvest21ABC410096173e-25447 - 50610060 / 60plus
Harvest35U35_438376173e-25447 - 50610060 / 60plus



Contig Sequence (617 bp)

>U35_43837 617 Hv_44K_v2
CTAGAATCTAGAAGACGTCCATCTCCACCCCCGGCGCGCGCCCGACTACTCGGGGCAGCG
GCGATGGGGAGGCGGAAGGAGCGCCGCCTGGCGGCCAAGGCGGCCTCGGGCCGTAGGGTC
AAGCTCGACCTCTTCCTCGATCCTTCCCCCGGGGAGGCATCTACTAAAGAGGGAGTAGGG
GAGGAAAACCGCGAGCAGCAAACTGGTGTTCCCACTTCACCATCTTCGTCAGGTGGGTTC
AATCAATTTCCTTCCAAGGGATATGTAAAGACGGCACATGCCTATGGAATGTAAATTTGG
TGGAAATTTGGAATTTTGTTCAAGCATGTGTATGCTCCAAATTTCTGGTTTGAGGCACAT
GTAGGGTTCCCGGCCTGCAAGGAACACTGAGTAAATTCTTCAGATCAGGCTGCCACTGTC
AAAACTGGGTGTGTTCCTACCGGTAATTTCTCTTTTGGCAGCATCTGAGCGTGGGGATTT
CAGGATGATTGTTGCCTCGATAAGAAGGAAAATCCTCTAGCGTTGCTTGGGCAATATAGT
GATGATGAAGAAAAGGATGAAGTTGCAACAGATCAACCCATTGGTGAAACTAAAGGAAGT
TCAACTGATGCCAGTGC



Homology of Contig U35_43837 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None