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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32350_PI390587928Hv_44K_v2GCAGCAGTGTTTTGTTTAACATCAGTGTTTATCATTACTTCTGACTTGATCGAAGTAGAC689GeneList: yellow
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 3.1413.3401.2810.5860.4010.414
Raw 54.87897.62430.49523.5882.9635.147



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_242627623e-25690 - 74910060 / 60plus



Contig Sequence (762 bp)

>U35_24262 762 Hv_44K_v2
TGGCACTCGGTTTGAAAGACAATGTGAAGCGAAAAATTCCAGACTCTAGTTCAAGCCTGC
ACCACCCATACGGTGGTGGAGTCCATGCATATTGGAACAGAGGATGGGAATCTCAAACCT
GATAGATACAAGATCTAGGCTTCAAAGAGTGTTGTGATCATTCAACATATGCAGATATAT
GCTTTCAATCCTTACTACCAATTTTTTTACACTCACACCGCAGAGACCATACATAGGATT
GTAACAGGCTAACAGTCACTGCTTAATTCTGAAGGAAACTGACAATACAGGAAACTGTGT
TCAGGCTGAACTTGTTCTCAAAGTCCCATACCTTCCAATTTTCATTGGTAAACGGTTCCA
ATACCTGGGGCAGGGAGCGGCCGCTGGGGCATCCACGTCGCTCCGGCTGTGGCCGCAGCA
GTTTCCTGGCTGTGGCAATTAAGAACGAGGAGGAGCGATGATGGACTCATGGGAGACAGA
CGGAGGCTAATTAATCAACTAATCTAGCTTGAAATTACTAGTAGTAGCAGGCCAGTAGAT
AGTGCCAAGGATCCGGCGTATCTTGGGAGGCCATGCATCCAGTTGACAAGTAGTTGGGCC
AGTATCTTGTCAACCGTTTGTACATACATATATAAGTTCCGATTTGCTACACATAATTTC
CCCTATGGATAGGAACTCCCCTCGTGTGTGCAGCAGTGTTTTGTTTAACATCAGTGTTTA
TCATTACTTCTGACTTGATCGAAGTAGACATGTTGGTCAATC



Homology of Contig U35_24262 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None