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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32240_PI390587928Hv_44K_v2GGTTCTGCTCCACCGGTGTTTGGGGTGAAAATATTATCAGTTTTACTATTTTATTACATC793GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.8193.1651.5130.8410.5600.448
Raw 27.37968.52029.32722.1814.7674.336



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC210638573e-25794 - 85310060 / 60plus
Harvest35U35_242958573e-25794 - 85310060 / 60plus



Contig Sequence (857 bp)

>U35_24295 857 Hv_44K_v2
ACACCACATCCACCGCCACCGCCACCGCCACTGCGCCCCACGTTTGCACTCCGGCGAGGC
GACCCGCGAAGATGCAGATCTTCGTCAAGACGCCGTCGGGGAGGACGATCACGCTCGAGG
TCGAGGGCGGCCTCGACATCGCCGACGTCAAGGCCAGGATCGAAGACAAGGAAGATGTGC
CACCGGATCAGCAGCGCCTCATCTTCGCAGGGAAGCAGCTGGAAGAAGGCCACACGCTGG
CGGACTATAACATCCACAAGGAGTCCACGCTTCACCTCGTGCTCCGCCTCCACGGCGGCA
GGGGCGGCAAGGGAGGAACCTACCCCAAAATCGAGCCCAACCTCCTTCAGCTCGCCCTCA
AGTACAGGCAGCTTAAGCTCGTCTGCCGCAAGTGCTATGCACGCCTTCCCCTCAGGTCTG
CCAACTGCCGTAAGAAGAAATGTGGCCACTGCAACGAGACGAGGACGAAGAAGAAGCTGA
AACCCAGGGACCCGTGAAGCACTGCACTGGCCAGCAAGAGAAAGAAAGCGATACCCAAGT
GTCACGCACCAGCTGAATCTGCCTTACCGTCTCCTTATATTAGCTTAATGATGAATGACA
CCGAACTAGCTTCTTGTTACTGCTAGTACCTTTTAAGTTCCTGCTGCTACTGGGTTTAAA
CACCCTAAATGCGTACTCTTGCGGAATAGTACTGTTGCATGATGGGTTATGTGATACTCT
GGATGGTGATGCATTGACATCGCAGTGCTTAAGGGAAATGCTAGTTACAAATTCCTGCTG
TTATAATCACATGGGTTCTGCTCCACCGGTGTTTGGGGTGAAAATATTATCAGTTTTACT
ATTTTATTACATCTAGA



Homology of Contig U35_24295 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g27930.11413e-52protein|ubiquitin fusion protein, putative, expressed
Brachypodium v1_2None
Arabidopsis v10None