- Probe CUST_32195_PI390587928
- Source Contig U35_35426
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_32195_PI390587928 | Hv_44K_v2 | ATAACTCCTAATCGAGGCAGCATATCCTGTCCATGGAGAACAATATCCTGAACACCATGG | 5 | GeneList: green MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 1.074 | 1.478 | 1.887 | 0.898 | 0.449 | 0.275 |
| Raw | 62.651 | 129.794 | 149.978 | 111.935 | 19.405 | 12.793 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest35 | U35_35426 | 185 | 3e-25 | 6 - 65 | 100 | 60 / 60 | plus |
Contig Sequence (185 bp)
>U35_35426 185 Hv_44K_v2 CGCCGATAACTCCTAATCGAGGCAGCATATCCTGTCCATGGAGAACAATATCCTGAACAC CATGGCTTGGAACCTCGCGGTGCCCACCCCGTACTTCTTCCTGGTGCGGTTCGCCAACGC AGCCGGGGGCGACCAGGAGCTGGCAAACCTGATGTTCTTATTAGCCTAGATGGCGCTCAT GGAAT
Homology of Contig U35_35426 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |