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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_32007_PI390587928Hv_44K_v2CCCTCCGTTCACAAATATAACATGTTTTGGATATTCCAATATGGAATACATACAGACTGA762GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3791.2841.1730.9010.4280.427
Raw 786.2121129.815913.5711090.529184.237199.903



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK3600708632e-24763 - 82210060 / 60plus ABC05990
JLOC1JLOC1_38224.18104e-23505 - 5649859 / 60plus
Harvest21ABC059908211e-24763 - 82110059 / 59plusABC05990
Harvest35U35_165818383e-25763 - 82210060 / 60plus



Contig Sequence (838 bp)

>U35_16581 838 Hv_44K_v2
GGGGGATCCTTGTAGACGCTCGCATAGCAGAGAGGCCGACGAACGGTGAGGTCGAAATCC
CGAGCGAAGAGAAAGGCGGACAGGAAGATGGCGGCGGCAGCACTACGTCCGGCGATCCTC
CGCCACATCCGACTCTCCCCCGCCATGGCGGCCCCTCTCGTCGGCGCCACCGCGGCCGGC
CAGCCCCTCGCCCTCGCGCGGTGGCTCGCGCGGCCAATGTCCTCCCACGACGCCCACCTT
ACCCGCGACGAGGTCGTCGACCGCGTCCTCGACGTCATCAAGTGCCACCCCAAGGTCGAC
CCCTCCAAGGTGACCCCCGAGGCGCACTTCGAGAAGGATCTGGGTCTGGACAGCCTGGAC
ACGGTGGAGGTGGTGATGGCGATCGAGGAGGAGTTCAAGCTCGAGATCCCCGACTTGGAG
GCCGACAAGATCAACTCGCTTCCGCTCGCCATCGAGTACGTTGCCAACCACCCCATGGCC
GGCTGAGTGCCCGCCCTTCCGATTGTTGACCGCGCCAGGGTGAGGATTTTTCTTGTTTCT
GTTTCGGGATGATGAATAATTGACTGGAGTTGTTCAGGAAAACTGGTCCCTGGTGCTCCA
CAGTGTGTCGGTCGCTATTGATCTTGGATGCAACTGTAACATTCTGCAGTGTTGCTGATG
AACTAGCCTTGTTGGCCACGCGCTTGTTTTTTGTTGTAGCATATCTGTTTAATCTAAATT
GGAATCTACTCATGTTTTTTGTTCACAAAAAAAAAAAAAACTCCCTCCGTTCACAAATAT
AACATGTTTTGGATATTCCAATATGGAATACATACAGACTGAAAAAAAAAAAAAAAAA



Homology of Contig U35_16581 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os07g12150.11324e-68protein|acyl carrier protein, putative, expressed
Brachypodium v1_2Bradi1g53880.11332e-66
Arabidopsis v10None