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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31776_PI390587928Hv_44K_v2TGTGTAAAACTGTGGCGCTTTGCCAAATTAAGTAGATTTTGGTGACCCTGTCTTAAAAAA839GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.3971.6531.0950.8380.4030.515
Raw 1136.0512076.6061210.2281442.028248.607343.431



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_209479053e-25840 - 89910060 / 60plus



Contig Sequence (905 bp)

>U35_20947 905 Hv_44K_v2
GGGGAACTCTAGGCGTTGCTGGTTACCTTGACATAATCGAGCAAATGAAAAATCTGATCA
AAGCTGCTGGAAAGAAATCTTATACACTGGTCATGGGACGGCCTAATTCTGCTAAGCTTG
CCAATTTTCCTGAGTGTGAAGTTTTCGTATATGTTTCTTGTGCCCAAACTGCTTTATTGG
ATAGCAAAGAATTTTTAGCCCCAGTTATCACACCATTTGAAGCTGTATTAGCTTTTAGCA
GAGGAAGAGAATGGACTGGAGAATATCTTTTGGATTTCAAGGAATTGATTAGTTCGGAGA
AACCAGAAGTTGCAAGCAGAAGTGAAGAAGCACGTTTTTCTTTTATCAAAGGCGGCTATG
TGGAAGATGATTGCCCTGAAGAAAACGAGGAGCATTCAGAAACGTCACTTGCACTGGCCG
AGCTAACGGAGAAAGCCCTAAGCACCCGAAACCAAAATAGCGATGCAGTTCTTTACCAAG
GAGGCGCGAAGTCTGCGATTGAATACCTCCAGGCCCGGTCCTACCGCGGTATGACTGGAG
AATACGAGGGTCCAGCGCCAGACTCGGTCTTGGTAGGCAGGACAGGGAGGGCTGCTGGTT
ACTCGGATGAGAAAACGAAGAGCCCACAATGAAGGAATGTTGTGTGCATTTGCATACTGG
ACAGTTTTGTCGGGAGAGCCTGTTGGTTCATTTTAGCGGGGAAATTGGCACTTCTGGATG
GCGTTTTACTGGCTTAGGGCCTTTGGGTTTTGTATACTAGAAACTGCTGTATTCATAGGG
TCAATTTTGTTGTGAGTCATGAGGCGCATGTGAAGGAACACTTGTCCCTTATGGAAATAT
GTGTAAAACTGTGGCGCTTTGCCAAATTAAGTAGATTTTGGTGACCCTGTCTTAAAAAAA
AAAAA



Homology of Contig U35_20947 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os11g16430.15076e-122protein|diphthamide biosynthesis protein, putative, expressed
Brachypodium v1_2Bradi4g20557.15082e-126
Arabidopsis v10AT3G59630.14912e-69diphthamide synthesis DPH2 family protein | chr3:22025355-22027776 REVERSE LENGTH=491