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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31770_PI390587928Hv_44K_v2TTGCACAGCAGATCTGTCCGTTTGTAATAATCCATAATACAAGGTTCGTTCTTCAAAAAA679GeneList: turquoise
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1111.5841.1990.9760.6260.408
Raw 64.489137.63394.016118.58427.69718.942



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_81756.219289e-22236 - 29010055 / 55minus ABC10972
Harvest35U35_186327503e-25680 - 73910060 / 60plus



Contig Sequence (750 bp)

>U35_18632 750 Hv_44K_v2
ATTCAAGTCAACAGGTATGCACAGCAAACTGATGCGGGGCAACAAACCAAGTGTCTTCTG
CTCTCACCAAAGGCTGTCGTGAATGTGAAGCCAAACCTGCAGATCATCGCCGACGACGTC
AAATGCACGCACGGAGCTGCCATCAGCGGGGAGCTCGACCCGAACGAGCTCTTCTACTTC
CAGGCGAGAGGCGTCAACGCCAACACGGCGACCGACGCCCTGCTTTTCTCGTTTGGAGCC
CAGGTGATAAACCGCATCCCGTTCAAGGCCATCGAGAAGAAGGCTCTAGCACAGCTCAAA
GAGCTGCTCGCCGTGTCAAGACAAAGCAATTGAGGAGGCCCTGAGGAAATCTTTGAAGTG
GTTTCAACACTTTTTTTGTGTTGAGGTGGAAAGAGCTGGGCGGGCACGCTGGCAAGCTTT
GGCATTGAACAAGGTGAGCGGCTAGAACTGCGTATGTTGATTGTTTGCCGGAGGAAATAC
CACTCTAGTCTTTTGAGATTCCGCTTATTATTTGTAAATTACTTGTTTATCCCTACCAAA
GAGCAAGAGTACATCAAGCTTCTTCCAAATAGATGTTTCTTCTTGTTAGTGGCAAATGTA
GATTGTTACCCCTATCATTGCCGTCGCCGATGTTCCACCCGACAGCTAGTTTGCAGGTAC
AGTACAGTGAATGGAAGCTTTGCACAGCAGATCTGTCCGTTTGTAATAATCCATAATACA
AGGTTCGTTCTTCAAAAAAAAAAAAAAAAA



Homology of Contig U35_18632 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None