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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31426_PI390587928Hv_44K_v2TGCATGCTCAAAATACACTCAAGGTAGTTTGGCAATGACTGCAAGTATTTACTTGCCTGC550GeneList: darkgrey
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.6080.7521.0881.6561.0531.161
Raw 4.1448.56312.56029.0936.2797.860



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC522646133e-25551 - 61010060 / 60plus
Harvest35U35_502116133e-25551 - 61010060 / 60plus



Contig Sequence (613 bp)

>U35_50211 613 Hv_44K_v2
CAAAGGGCTCTTGCCGATGTCGGCCCCAACGTTCTCTGGTGGATTGGTGCACAGAGCGTT
TTCTACCACCTGTATAACCAGGTGTCCTACATGTCTTTGGACCAGATTTCTCCATTGACG
TTTAGCATTGGCAATACAATGAAGCGCATATCAGTTATTGTTTCGTCAATCATTATCTTC
CGTACACCTGTCCGTCCTGTAAATGCACTAGGAGCTGCCATTGCCATCTTTGGCACATTC
CTGTACTCTCAGGTAAATTTGGTTGCTTTAAGATTTTCTTCTGATTGTCCTTCCCTTGTA
TCTATTGAAATAAAACTTTCTTCTACTGGACTTAGCATTTAATATCACCACTCCAGTTTG
TGCATACAATTATGTGGCCTCTCCTATGGCCATAGAGGTGCAGAGATAGCCCAAATTATG
AAACATGCTACTTTCTGATCCTTGCTGTTGTTGTAATTCGAAATTACGATTGGTTGCTTT
GAGGGGCAGGTGGCATTTTATGAAAAACGTGACTAGATCATGAAGAGAAATCATCAAATG
ATTATGTCAATGCATGCTCAAAATACACTCAAGGTAGTTTGGCAATGACTGCAAGTATTT
ACTTGCCTGCTCT



Homology of Contig U35_50211 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None