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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31227_PI390587928Hv_44K_v2ACTTACACTGAGTTGTTTCTTTATGTGGTGGCATTACAGCAAAGGCACTTAGTAGAGATA635GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37481118112e-24724 - 78310060 / 60plus ABC35052
MLOCMLOC_26048.211702e-24658 - 71710060 / 60plus None
MLOCMLOC_26048.318652e-241358 - 141710060 / 60plus None
MLOCMLOC_26048.19002e-24637 - 69610060 / 60plus None
MLOCMLOC_26048.410942e-24542 - 60110060 / 60plus None
MLOCMLOC_26048.519172e-241358 - 141710060 / 60plus None
MLOCMLOC_26048.620012e-241358 - 141710060 / 60plus None
JLOC1JLOC1_17714.913058e-25658 - 71710060 / 60plus
JLOC1JLOC1_17714.511548e-25507 - 56610060 / 60plus
JLOC1JLOC1_17714.419218e-251358 - 141710060 / 60plus
JLOC1JLOC1_17714.112348e-25587 - 64610060 / 60plus
Harvest35U35_415806983e-25636 - 69510060 / 60plus



Contig Sequence (698 bp)

>U35_41580 698 Hv_44K_v2
GTTGCGTATTTTTGTTGTATTGCCGTCGTAGTGTTGCGATATTTGTGATAGTCTAGTTTC
TGATTATTTCACTTATAATTTTAAGACTTCTTAGGCGCATACTATTTTAATTCTCATAAT
ATATCATCATGTTCTTCTACATTCCCATAGGGACCTGTTCCTGAAAAGCCCAATTAAAAG
CAACCCAAGGTCCTGGTGTTCCATTGAATATGTTGAATTTGAACATTTATAAATGGTGTA
CCAAATGTAAACTTATTTCTTATGTAGGATAGGACTTGAATTTTGTAGTTGATTGCCAAT
AGACTGCCAAACATGGTGATGTTTCTGGACAATTTAAGGGTCTTCGTCGTAGCCACGTCA
CCGAGTGCTTTTATTGCATCTAGCTTTGTGATCAAGAAGATTGGCCTGAAGAAAGCTGGG
GACATTGTGGTAAGAGCAGGTTGTGCCTCTCTCCTATATCTATTTCAATGTTTTTTCATC
GCAGACAAGGTTAAAGATAAATTTTTAATATTTCTACTGCTTTAATCCATTAATGATTAA
TCTACGCTTTTTACCCTCATGATTTATAGGTTCTCGAGGCTACTCATACTTATATGAACC
GTTATAGTGGATAGGAATGGTAACTAGTAATTATCACTTACACTGAGTTGTTTCTTTATG
TGGTGGCATTACAGCAAAGGCACTTAGTAGAGATACTA



Homology of Contig U35_41580 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None