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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_31068_PI390587928Hv_44K_v2GAAATCATAATGTGCATGTCATCCTGCTGCCTTGGCCTGCAGGTTTGGTCATATATACTC838GeneList: green
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1991.2871.0570.9560.4380.499
Raw 1784.2172966.0602160.7173074.795497.153611.209



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC084319213e-25839 - 89810060 / 60plusABC08431
Harvest35U35_34189213e-25839 - 89810060 / 60plus



Contig Sequence (921 bp)

>U35_3418 921 Hv_44K_v2
GTTGCCGATGCTGCTCCACCAGAAGATTCTGAAAAAAGCCCACATGATGACAAGACTCCG
AGTCCAAAGTTTGCCATGATCCTGGAAGCTCTTGGCGAACTGAAAGAGCCAAATGGTTCA
GAAGTTACTACAATTTGCAATTTTATAGAGCAAAGGCATGAGGTGCAACCAAATTTTAGA
AGGTTGCTTTGTGCGAAATTACGAAGGCTTATAGGCGTGAACAAAGTTGAGAAGATTGAC
AAGTCCTATAAGCTGACGGATTCATATGCAAAAAGGGCTCTGGCTCCAATGAAAGATTCA
TCTCTCAAGAAGAAGGATCCAGCCAAGTCATCCAAGGCAGCAAAGGGTCTAGCCCTGTTT
GCGGCCGCGAGCCCTGCACTGGACGCAGCTGAAGCTGCAGCGATGAAAGTAGCCGACGCG
GAGGCCAAATCACACCTCGCAAACGAGCACATGATGGAGGTTGAAAGGATCGGCAAGATG
GCCGAGGAGACCGAGTCTCTCCTTGCGCTCGCCGAGGAGCTCTACCAGCGATGTTCAAGA
GGAGAGGTGCTCACAATACTGCAGGTGGCGAAAAGGGAGATTTGATGATATTATCGGCCC
CGTTAGCTGCGCGCCGGCATCTGCCCTATTGTACATGGATGGATAGGTTGGCGCCGACAT
CTGCTCCTTTGTACATGGATGGACGGATAGGTTGGCCCAGCCTGTTGTCTTCTTGCCCGC
CTGTTGTCGCTGTGTTGTAGCATAACCTGAATCGATTCGTTGGTTGTACCTGATGGGCAT
TCATTTCGTTGCCTAGGATGATTTTAAACTTGCTGCATTCTGGATACTGTTCTGCGTTGA
AATCATAATGTGCATGTCATCCTGCTGCCTTGGCCTGCAGGTTTGGTCATATATACTCCT
CCTTAAAAAAAAAAAAAAAAA



Homology of Contig U35_3418 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None