barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30797_PI390587928Hv_44K_v2CCACCTTAGCAGGCAGATTTTACAGAGCTATCAGAACTACATTGACCAGTGCATCACCTA618GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_44162.126643e-221993 - 20519859 / 60minus ABC10691
MLOCMLOC_44162.223643e-221693 - 17519859 / 60minus ABC10691
MLOCMLOC_44161.166043e-224980 - 50389859 / 60minus ABC10691 ABC13271
MLOCMLOC_44161.358093e-224185 - 42439859 / 60minus ABC10691 ABC13271
JLOC1JLOC1_28595.230731e-22616 - 6749859 / 60plus
JLOC1JLOC1_28595.127731e-22616 - 6749859 / 60plus
JLOC1JLOC1_28594.158121e-224188 - 42469859 / 60minus
Harvest21ABC210566783e-25619 - 67810060 / 60plus
Harvest35U35_90796783e-25619 - 67810060 / 60plus



Contig Sequence (678 bp)

>U35_9079 678 Hv_44K_v2
CCTTCGCCCCCCGCCCCCCGCCCCCCGCCGCCGCAGCGATTCTCCGAGCCGAGTCCTTGC
TTCTGACCAGCCAACGTCTCGCCGCCGGCCGGGGGAGCGTCTTCGGCGGGGTAGCTCCGG
CAATCGTAGCCGGGGGGATAAAGTGGGCTCCGTAGGGGAGTCCTAGGGGGGGTGACAAGG
GGGTTAGATCGGGCAAGATGAACCGCTCAATATCCTCCGCCGTGACCCCTGCTGATGCCG
CCGCTAACCCTAGGTTTTCTTCTCCTTTGCCCGTATCTCACCCGACCGTTATTCGTTTTC
TCCTCGTCGATATTGAAGTAGTCTATGCTCAGAGGTTCCTCCATTAGCTTAGTGTAAATA
TTAGACTTGTTGGGGTTTAGTTTGCTAGAAGGAATTAGTCTCTGCTTGGTGTTCATTTCT
GCTTGCTACAATGGCTGCGATGAACGAAAAGGTGTTGGCTAAATGTGAACAGAATATAGT
TAGCCTCAAGAGGAAGCGGGACAGCCCCGCTGCATATCATGCTGATGCCTGCCACACCTC
TCAATCGCATCAGCATCCTACTGGAAACTCTGATATCAGGTTGTATGTTGGTGAAGATCG
CAAGGCGAACATCGCGTGCCACCTTAGCAGGCAGATTTTACAGAGCTATCAGAACTACAT
TGACCAGTGCATCACCTA



Homology of Contig U35_9079 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None