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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_305_PI415269222Hv_44K_v2GGAGTGAGGTGTAAATTATATATATATACTCTAGGCAGTAGTAATACGTGCAGGGGGATC549GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37538619522e-241848 - 190710060 / 60plus ABC02102 ABC14370
MLOCMLOC_26636.19052e-24494 - 55310060 / 60plus ABC14370
JLOC1JLOC1_18082.18688e-25494 - 55310060 / 60plus
Harvest21ABC143707943e-25228 - 28710060 / 60minusABC14370
Harvest35U35_210308083e-25522 - 58110060 / 60plus



Contig Sequence (861 bp)

>TA46062_4513 861 Hv_44K_v2
CACGCGTTCCGCAGTGGAACAACATGCAGTACGTCACCAGCGCCGCCTTCCTCNCTCTCC
GTCTACTCCGGGCTACCTCACGGAGGCCGGCGAGGGCGCGGCCGTGACGTGCGCCGGGGG
CGCGTCGGCCGGCGCCGGCGAGGTGTTCGCGCACGCCAGGGCGCAGGTGGACTACGTGCT
GGGGAGCAACCCGCGCGGGATCAGCTACCTGGTGGGGTACGGCGCCAAGTTCCCGGCGAG
GGTGCACCACCGCGCGGCGTCCATCGTGCCGTACAAGGACAGGAAGGAGTTCATCGGGTG
CGCGCAGGGGTTCGACGACTGGTTCGGCCGCAAGAGCGCCAACCCCAACGTCGTCGTCGG
CGCCATCGTCGGCGGGCCCGACCGCCACGACAGGTTCAGGGACGACAGGGTCAACTACAT
GCAGACGGAGGCGTGCACCTACAACACCGCCCCCATGGTCGGCATGTTCGCCATGCTCAA
CAGGGTGGCGCGCCAGCAGGACCCCACGCCGGCGACGACACGGCCGGAGGGCACCACAAG
TACTGCGGCGGAGTGAGGTGTAAATTATATATATATACTCTAGGCAGTAGTAATACGTGC
AGGGGGATCTGTACAATTTTGCCCCTCCTATTCTTTTGTTCATTCTTTTCTGGTAGACGC
GAAGGCTCTTCTCTTCTTCGCAGGGATTATTTGTATACGGGAAAAATAGGGTGGACGCAT
TTGACAAGCAAATGCGAATTCCCTCCCCGTAAATATAAGATAAGAGGAAAAATATATATG
TATATGAAATTAGTCTACTGGCCGGATTTCCAATATATGAGAATGTTTTTCCAAANCACA
AGATTNAAAATCCCATTAACA



Homology of Contig TA46062_4513 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os06g13830.13815e-83protein|endoglucanase, putative, expressed
Brachypodium v1_2Bradi1g44430.15452e-77
Arabidopsis v10None