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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30491_PI390587928Hv_44K_v2GTTCGGAAAAACTTCATTTAGTGAAAAAATTTGTTCCGTTTCGGTGGAACATGTGACAAA1522GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_58041.620149e-221750 - 18079857 / 58plus ABC09141 ABC45334
MLOCMLOC_58041.721199e-221855 - 19129857 / 58plus ABC09141 ABC45334
MLOCMLOC_58041.518179e-221553 - 16109857 / 58plus ABC09141 ABC45334
MLOCMLOC_58041.118993e-211843 - 18999856 / 57plus ABC09141 ABC45334
MLOCMLOC_58041.218963e-211840 - 18969856 / 57plus ABC09141 ABC45334
JLOC1JLOC1_37681.216175e-221508 - 15659857 / 58plus
JLOC1JLOC1_37681.116635e-221554 - 16119857 / 58plus
Harvest35U35_1725715973e-251523 - 158210060 / 60plus



Contig Sequence (1597 bp)

>U35_17257 1597 Hv_44K_v2
CACGAGGCTTGCAACCCTGCTGTACGGGGCGACGGACGAGTTGACGACGACTCCGCGATA
GGAATATTCCGTGCCAGGCCGCCGCTTCTTAAAGGCTTCTCTGGCTTCGACTCCGACTCC
GATAGGTGGTGGTGGAGGCTTTCTCTGATAGGAGGAGAAGGAACCAAGGAGGGAGGCATC
AGAAGCGCCATGGATTGCCTCTGGCACGCCTCCGTCATTGCCCTTGTACTCCTATTCCTT
GGAGGATCAGATGCCAACCCAGCTGCCCGTCGCCACGGTCAGCTGGATGTAAACCACAAG
AAGCAGCCACTACAGACATCCAGACCTTACAACATTGCCCACAGGGGTTCCAATGGCGAA
ATACCCGAAGAGACATCTGCGGCATACTTGAGGGCTATCGAGGAAGGTGCAGACTTCATA
GAGACTGATATACTTGCATCAAAGGACGGGCATCTCATATGTTTTCATGATGTAACACTG
GAAAACACGACCGACATCGGCAACCGTACTGAGTTCGCTGCCCGGAAGAGAACCTATGAA
GTCCAGGGAGCGAATATGACTGGGTGGTTTGTCGTGGATTTTACACTAAGAGAACTGAAA
TCACTGAGGGTGAAACAGCGCTATGATTTCAGGGATCAACAGTATAATTGGAAGTACGAT
ATTCTTACATTTGATGAGTTTATCTTGATTGCACTTCATGCTGACAGGGTGGTCGGAGTA
TATCCAGAGATAAAGAGTCCTATTTTCATCAACCAGCATGTCAAGTGGTCAGGTGGCAAG
AAGTTTGAGGACAAGTTTGTCGAGACGCTTCTCAAGTATGGCTACAAAGGCAAATACATG
TCCGAAGATTGGCTCAAGAAGCCGTTATTCATCCAATCATTTGCTCCAACTTCACTAATT
TACATCTCAAACATGACAAATGCTCCAAAACTGCTTCTAATAGATGAAACCACAGTTCCA
ACTCAAGATACCAACCAGTCATACTATGAGATAACTTCGAACGATTATCTCACGTTCATA
AGGAAGTACGTAATTGGGATTGGGCCATGGAAGGATACAATCATTCCCCCCGAGAATAAC
CATTTAGGCCCTGCAACCGATCTCGTGGCACGGGCACATGCTCTGAATCTTCAGGTGCAT
CCATACACATTCAGAAATGAGAACAAATTCTTGCATTTCAACTTCCATCAAGACCCTTAT
GCTGAATATGAGTACTGGGTCAGAGAGATCGGAGTCGACGCGCTGTTCACCGATTTCACC
GGCAGCTTGCACAAGTACCAGGAGTGGACAACTCCACACCAAAAGAAGGAAAAGAAATGC
AGAGGAACTCCTGCATGAGATCGCCAACACTCTGAATGTTGATGCTCACTAAACCTTAGG
CTGCCAAGTCTGTATACCTCCTCCCTTTTGGAGCTATTTCATTATTGTTAGTACGGAGAA
AATGAACCGGTTAATACTAGTACTATTCTATGTAATTGCTTCCTAGAAATCACGGGAAGT
GCCAACTGTAGAGCATCATGGAGTTCGGAAAAACTTCATTTAGTGAAAAAATTTGTTCCG
TTTCGGTGGAACATGTGACAAAAAAAAAAAAAAAAAA



Homology of Contig U35_17257 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os03g40670.13920.0protein|glycerophosphoryl diester phosphodiesterase family protein, putative, expressed
Brachypodium v1_2Bradi1g14983.13740.0
Arabidopsis v10AT5G08030.13720.0PLC-like phosphodiesterases superfamily protein | chr5:2575152-2576770 REVERSE LENGTH=372