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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30453_PI390587928Hv_44K_v2GTGCTGGTGCTTGTAACGAGTTCCAGATTTTATAATATGGATATTCATTTTGCATTCGAT135GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_29694.15913e-21316 - 3759758 / 60minus ABC00009 ABC00020 ABC00026 ABC00030 ABC00035 ABC00037 ABC00059 ABC00117 ABC00122 ABC00131 ABC00139 ABC00140 ABC00142 ABC00153 ABC00159 ABC00160 ABC00163 ABC00172 ABC00173 ABC00174 ABC00175 ABC00180 ABC00197 ABC00202 ABC00203 ABC00234 ABC00250 ABC00316 ABC00434 ABC00488 ABC00499 ABC00500 ABC00576 ABC00659 ABC00665 ABC00695 ABC00700 ABC00724 ABC00877 ABC00980 ABC27134 ABC27412 ABC29158 ABC30671 ABC32179 ABC40319
JLOC1JLOC1_19731.14612e-21186 - 2459758 / 60minus
Harvest21ABC403193693e-25136 - 19510060 / 60minusABC40319
Harvest35U35_435323693e-25136 - 19510060 / 60minus



Contig Sequence (369 bp)

>U35_43532 369 Hv_44K_v2
TTTTTTTTTTTTTTTTTCACCAAACAAACCCAATACTGTTTTGCCATTACCCGGAAAACA
AAATAATGATTTTAAAAAAAGGGGATTCTAATCTACGTTTATGGAGTCCAAAATATATAT
ACTACTACAATTCAAATCGAATGCAAAATGAATATCCATATTATAAAATCTGGAACTCGT
TACAAGCACCAGCACGCAGCTGCACACACATGACCAGCCCACCAAAAAACGACGACCCGC
CTGACCACAACTACACCCGAAGCACCTGCACCACCCGAGGGCTTACCCTCCAAACCCGTA
AAGGGTGCGGCCCTGGCCCTTGACCCCGTAAACAACGTCCATGGCGGTGACGGTCTTGCG
GCGGGCGTG



Homology of Contig U35_43532 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None