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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30400_PI390587928Hv_44K_v2CCCTAGCTGACTATAGGGCCAGTTTTTTCCAGATTTTTAGCTTATTTTAAAATAAACCAG926GeneList: purple
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0120.2011.2801.3510.9021.458
Raw 6.275267.4041440.9672382.383541.002962.839



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC117369813e-25922 - 98110060 / 60plusABC11736
Harvest35U35_196749863e-25927 - 98610060 / 60plus



Contig Sequence (986 bp)

>U35_19674 986 Hv_44K_v2
TGACGCTCGGCACCGAGACCGACGGCTCCATACTCTGCCCTTCGTCGTTCAACTCAGTTG
TCGGCATCAAGCCGACGTTGGGGTTGACCAGCCGGGCCGGCGTCATCCCCATCACCCCGT
TGCAGGACACCGTGGGGCCGATGTGCCGGACGGTGTCGGACGCGGTGCACGTGTTGGACG
CCATCGTCGGCTACGACGAGCACGACGCCGCGGCCACCGGAGCGGCATCCAAGTACATCC
CGCGCGGCGGGTACACGCAGTTCCTGAAGAAAGATGGGCTCAAGGGGAAGAAAATCGGCG
TCCCCAATGGCTTCTTCCAAGGATATGGACAGGCGCAGCTGAATGTGTACAAGCAGCACC
TAGCCACGATGAGGAAACTTGGAGCCGTGGTGGTCGAGAAGCTGGACGTCGCTGCCAATT
TGACTGCTCTATTGGTTGAGATTGGTTCCAACGAGGGGATTGCGATGCAGTCAGAGTTCA
AGCTGAGCATAAACGCCTACTTGGCAGACTTGGTCCACTCCCCTGTCCATTCCCTTGCAG
ACATCATAGCATTCAACAACAAGCATCCTGTAGAGGAGAGGCTGAAAGACTTCGGGCAGC
CCGACCTTATCGCGGCTCAAAACACAAACGGCATCGGCCCCGTGGAGAAAGACGCAATCC
GTCGGCTCAAGGAGCTGAACACGAATGGGCTGGAGAAACTGATGAAGGAGCTGGCGCTGG
ATGCGATCGTGGCGCCCAACTACGATGCTTCCAGCCTTCTCGCCATCGGTGGCACCCCTG
GCATCGTTGTGCCGGCGGGGTATGACGAGCAGGGGGTCCCCTTTGGCATATGCTTCGGCG
GGTTGCAGGGGTACGAGCCGAGGTTGATCGAGATGGCATATGCTTTCGAGCAGGCTACCA
ATGTTTGGAGGCCACCCATGTTCAAGCCCTAGCTGACTATAGGGCCAGTTTTTTCCAGAT
TTTTAGCTTATTTTAAAATAAACCAG



Homology of Contig U35_19674 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g10460.15041e-152protein|amidase, putative, expressed
Brachypodium v1_2Bradi5g00860.15201e-134
Arabidopsis v10AT4G34880.14663e-92Amidase family protein | chr4:16615549-16617424 FORWARD LENGTH=466