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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30349_PI390587928Hv_44K_v2ATTATTCTGCACTCATGTTCCATTGTCACACACACACACCCATGTTGGTCGGATGTTTGT880GeneList: green
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.2901.3731.3640.9600.4020.358
Raw 2787.1934625.1674019.5174369.853649.320636.970



Probe Sequence's BLAST hits in Barley Unigene Datasets

This probe has no hits to the blast databases


DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence



Contig Sequence (1146 bp)

>U35_19695 1146 Hv_44K_v2
GGTTTTGGTGGACANGGCCGGGGTGATTTCTCTAGTGGACGTGGTGGAAGAGGGCGTGGA
TTTGGAGGACGGGGACGTTCTGACCGAGGTCACACGATCGTTTTATCTCAGATGGACGTG
GAAGGTATGATGGCCGTCGAGGACTTGACAAGGGTCGAGGCAGGAGCTACAGCCGTAGCC
CAGATAGAAGCCGCTCGCGAGGCTATGACAGAAGAAGTGATAGCAGGAGCCTAAGTAGTA
GGAGTAGAAGCCGTAGCAGAAGCTGGTCACGCAGCAGGAGCCACAGCAGGAGTTGGTCAC
GGAGCCGCAGCCGTAGTCGCAGCAGGAGCAGAAGCCATGATCAGGGTCCAGTAGAACGCA
GGCCTCGGGTAAGATCTGGTTTTGATGTGCTGCCACCTGCAACTGAAGCTGGAGCTGCTG
TAACTGGGCCACTTCCTGTACCACTACCTGGTTCAGTGTCTGATGTTGCTGCACCCAAAC
CTAGACAATCGCTGGTGGATGCATCTGATATGTCACCTATGTCGCCTGGTGGCTTGGTCC
AGGCCCAGGAGGGTGCACCGTTCATGGGTGGGAACAATGCCAACATTAGCAGCAGACAGG
CTGACCAGCCTTCCCAAGGGACTGATCTTGTAATACCGCCGAGCTTTTCTGCAGCTGCAA
ATTTTCCAGGTCCGGTAGTTCAGCAGGATGCCCCATGATGCAACCTGGTGGTGCGCAGAG
GTGGACGAGTCGGCGCCTATGGCGGGATTAAGAGGCAGGGTGGCGCCCATGGTCGGTGAT
AACGGCCATGCTGAAAACACTGATATAATTACAAAGGCTGCCAATCTGTGGAACCAGCTG
TATTCCTGTTTTCCAAGACTTGCACTCGTGCAGGTGCCTGATTATTCTGCACTCATGTTC
CATTGTCACACACACACACCCATGTTGGTCGGATGTTTGTTTGCCTTGTCCAGCAGTGGT
GATTTTTCATATGATGTGTAAATTTCCCCCTAGAGGCATCTGCATAATTGCTGTTAGGTT
TGTGATGCTATTTTACAGTCTGTCGAGCTGGTTTGGTGTGAACTTGCAACTGCTGCCTGT
ATGGTCTATAGCTTGCTTTCTAAGCGTATAAAACATCATTTGACTTTTTAAAAAAAAAAA
AAAAAA



Homology of Contig U35_19695 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None