barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30217_PI390587928Hv_44K_v2CTGTACACCTTCTAGGGTGCAATTAAATAAAGTTCATGATTCCCTTTGTAACTTTAGTGA560GeneList: darkolivegreen
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.0880.2410.5541.9311.5932.853
Raw 6.37228.66663.457337.05697.975197.226



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC263266343e-25561 - 62010060 / 60plus
Harvest35U35_110776343e-25561 - 62010060 / 60plus



Contig Sequence (634 bp)

>U35_11077 634 Hv_44K_v2
AAATTACTAGATCATTAGAGTTTCAATGGGAAAGCTCCTTGTTATCGTTGCCATCATATT
TTTTGTTTCCAATGAGGTTAGAGGCACACCACAAACAACATGCAAGGAAGCAGTAGACAT
TGACCAGCGTATCAACTATGAATTTTGTGTGTCACAACTACTGGTTCACCATGAAAGCAC
TATAGCCGATACTTGGGGCTTGGCTAAGATTACGGCCTTAATGGGGGCTAAAAATGTTAT
CCATACAAAGGCCTACGACGACACGATCCTTGGAAAGCCAGTTATTGGAGATAAGATGGA
ATAAGTGCTAAAGGGTGCAAGAAGTTGTACAATCGCACTTTTATGTCATTCATCGTTGCA
CACGAGGACCTTAAAGTGCGCAAATATTCCGCATGTAAACATAAGGTTGCAGAGTCCATC
AAGTTAGTGCACCAATGCGATGAAGCCTTTGAGAAAGCCGAAATTGAGTCAAAACTCACA
AAGCAAAATGCACACTCGGTGCAAGTGGCCATCATCTCCACAGGCATTACCAACCTCATC
ACACTCGAGAATTTAGTTTACTGTACACCTTCTAGGGTGCAATTAAATAAAGTTCATGAT
TCCCTTTGTAACTTTAGTGATTATTTGCATAAAA



Homology of Contig U35_11077 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None