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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_30098_PI390587928Hv_44K_v2TGGGACTTAACCAAGTCTCTGTCGATGCTATACTCATGAGATCTTACAAAAATATTCATA583GeneList: grey60
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.7013.1990.6850.4920.9870.879
Raw 18.74033.7355.6474.9382.7642.735



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_237816753e-25584 - 64310060 / 60plus



Contig Sequence (675 bp)

>U35_23781 675 Hv_44K_v2
CTACACCTTCGCCAACGAGAAGTGCGGCGGAGCGCGCGCTACTACTCGCACGGGTGGCGC
ACCTGGGCGGCCGTGGCGGTGCAGCTCGCGTGGCGGCGGTACAAGCACCGCAAGACGCTC
ACCTCGCTCTCCTTCATCCGGCCGCGGAGGCCGCTGTCCAGGTGCTCCTCGCTCGGGGAG
GAGAAGCTGCGGCTCTACACCGCGCTGCTCACCTCGCCGAAGCCCAACCAGGACGACCTG
CTGCTCTGACCTCTGAGTCTGAGACGGACGGGACAAGGCCGCGCGCGCGCTATGGTCCCT
TTGCTTTGCTTTGCTCTGTCGTCAGAGCGCCGCGCGAATGCAAGGTACCGACGACTCGTT
GCGGTTTGGGATGGAATCCATCGAGCCGAGGGTTCAAAGGAAGAAGGGGAAAATGCTGCT
GCTATTTCGCACATTTGACAAATGTCAGTTCTCCAGGGACTAGCTGGAACTGTTTTTCAC
GAACTCTCCGAAAAAGCACGGATATAAACAAGAAAATAAATGCCACCCCGTATTCGCTGA
AGGACGTGTTTCTCTGTTTCGGTATTGCTAAATCGCACTTGATTGGGACTTAACCAAGTC
TCTGTCGATGCTATACTCATGAGATCTTACAAAAATATTCATACAGTATTTTCGTCTCAA
AAAAAAAAAAAAAAA



Homology of Contig U35_23781 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None