barSeed
Links

Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_3002_PI390587928Hv_44K_v2CTGCTTCCTTTTTCTGTGTGGAGACGGGCTCCTACAGTAAATGTCTAAATGAAAGCTACA785GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_43315.49122e-24333 - 39210060 / 60plus None
MLOCMLOC_43315.217232e-24424 - 48310060 / 60plus None
MLOCMLOC_43315.115472e-24338 - 39710060 / 60plus None
MLOCMLOC_43315.312762e-24421 - 48010060 / 60plus None
MLOCAK37396915887e-231361 - 14209859 / 60plus ABC21024
JLOC1JLOC1_27999.111798e-25338 - 39710060 / 60plus
Harvest21ABC139108483e-25786 - 84510060 / 60plus
Harvest35U35_62978483e-25786 - 84510060 / 60plus



Contig Sequence (848 bp)

>U35_6297 848 Hv_44K_v2
GGTAAGAAGAGCATGTGCAGCGATACCAGTACACGACGACACAGACGGTGCTCGGCGTGC
TCGTGCTGCGTGTGGACTCGCCCATCTACTTCGCCAACTCCGGCTACCTGCGCGAGAGGA
TCACCCGTTGGATCGACGATGAGAGGCGAACGGACCAGCGGCAAGGGCGAGACCGGCGTG
CAGTATGTGGTCCTTGACATGGGTGCAGTTGGCAGCATTGACACTAGCAGGACGAGCATG
CTGGACGAGCTCAAGAAGACCCTGAACAAGAGAGCAATTCAGATCGTGTTGGCGAACCCG
GGGAGCGAGATCATGAAGAAGCTGGACAACTCCAAGGTGCTGGAGCTCATCGGCCACGAG
TGGATCTTCCCGACGGTGGGCGAGTCCGTGGCAGAGTGCGACTTCATGCTGCACTCCCAC
AAGCCCGGCATGGTGGTTGACAATGCCATGCAGCGAGAACATGGTCTGATTAGGGTCTGA
CGAAACACCATCAAGAGATAGCTGAATATTTCAACCGAAGGGGTGTGTCTTTAATTTTCC
TTTTGCACAGCCGGGTCTCCAACCCATCCGATGCAGATGGAGACGCACAAGTTCACGGAT
TGGCCAATGAGATATGTAGATTGAGAAAATATGACCTTTCAGATAAATGATGTGCATAAT
TTGGACCAGTGGCATGATGCATTTTAGTCCTGCTGATTTCCCCTTCATGTAGCCTGAACT
GTGGTGTGTGCAATGTGCATCTCACCTTCTGTTGGTATTGGCTGTAGATGCAGAAAACGG
AAGATCTGCTTCCTTTTTCTGTGTGGAGACGGGCTCCTACAGTAAATGTCTAAATGAAAG
CTACACTA



Homology of Contig U35_6297 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None