- Probe CUST_30001_PI390587928
- Source Contig U35_6619
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_30001_PI390587928 | Hv_44K_v2 | ACTAAGGTGCGTTCTTGGAAAATGAATAATGGGAGTAAATCACAACGTGCTGGGTGGGCA | 121 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_37499.6 | 3779 | 2e-24 | 3659 - 3718 | 100 | 60 / 60 | plus | ABC16778 ABC24048 |
| MLOC | MLOC_37499.8 | 3438 | 2e-24 | 3318 - 3377 | 100 | 60 / 60 | plus | ABC16778 ABC24048 |
| MLOC | MLOC_37499.4 | 4063 | 2e-24 | 3702 - 3761 | 100 | 60 / 60 | plus | ABC16778 ABC24048 |
| MLOC | MLOC_37499.3 | 4181 | 3e-22 | 3824 - 3879 | 100 | 56 / 56 | plus | ABC16778 ABC24048 |
| MLOC | MLOC_37499.2 | 4579 | 3e-22 | 4439 - 4494 | 100 | 56 / 56 | plus | ABC16778 ABC24048 |
| MLOC | MLOC_37499.5 | 4050 | 3e-22 | 3693 - 3748 | 100 | 56 / 56 | plus | ABC16778 ABC24048 |
| JLOC1 | JLOC1_24284.5 | 4192 | 8e-25 | 3677 - 3736 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24284.4 | 4221 | 8e-25 | 3706 - 3765 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24284.2 | 4239 | 8e-25 | 3724 - 3783 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_24284.6 | 4199 | 1e-22 | 3688 - 3743 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_24284.3 | 4250 | 1e-22 | 3739 - 3794 | 100 | 56 / 56 | plus | |
| JLOC1 | JLOC1_24284.1 | 4232 | 1e-22 | 3721 - 3776 | 100 | 56 / 56 | plus | |
| Harvest21 | ABC16778 | 659 | 3e-25 | 340 - 399 | 100 | 60 / 60 | minus | ABC16778 |
| Harvest35 | U35_6619 | 520 | 3e-25 | 122 - 181 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_6618 | 875 | 5e-23 | 422 - 477 | 100 | 56 / 56 | plus |
Contig Sequence (520 bp)
>U35_6619 520 Hv_44K_v2 TGTGTAATTTCAGTGCTAAACATTGGGCTTCGCTGCACCAAGCCATACCCGGACGAGCGC CCCAACATGCAGGAAGTGACTGCAGGGCTGCATGGAATCAAGGAGGCTTATCTCAGAGGG TACTAAGGTGCGTTCTTGGAAAATGAATAATGGGAGTAAATCACAACGTGCTGGGTGGGC AACACGCTCTGCTTGTGCTGCTCCTCAAGACAGAGCTTCCTCCCTGATGATGGTCTCCCA TGCTGTTTGGGTGATGGATCTGTTCAATTCGGGATAACCTCTTGACTGTTGTGATCTAAA AGATCTTATATTAGTTTGCAGAGGGAGTACTTTTTTGTGTGTGGAATCAGCTGACCTTTA TTAGTAGTTTGAATTAAAGTTACATGGTTGGCATGTTGCTAGTAATGTAATAGTATGATG TAGTGGTACGTCCGGGCAAGTATTGTAGAGCTGACAACGATATTTCTTACAGCCTAAATC TACATCCTATATCTGTTTTCTTGAAAAAAAAAAAAAAAAA
Homology of Contig U35_6619 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |