- Probe CUST_29873_PI390587928
- Source Contig U35_44332
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_29873_PI390587928 | Hv_44K_v2 | AGATCAAGAACTACTGGAACACCCACCTCAAGAAGAGGCTAGCCAAGATGGGGATCGACC | 329 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK358325 | 1703 | 2e-24 | 348 - 407 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.4 | 5501 | 2e-24 | 4244 - 4303 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.6 | 4700 | 2e-24 | 3654 - 3713 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.7 | 2963 | 2e-24 | 1917 - 1976 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.10 | 2380 | 2e-24 | 1142 - 1201 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.1 | 6020 | 2e-24 | 4781 - 4840 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.2 | 4031 | 2e-24 | 2792 - 2851 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.9 | 3286 | 2e-24 | 2932 - 2991 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_58915.5 | 4630 | 2e-24 | 3373 - 3432 | 100 | 60 / 60 | plus | None |
| JLOC1 | JLOC1_38302.9 | 3882 | 8e-25 | 2623 - 2682 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.8 | 3864 | 8e-25 | 2605 - 2664 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.7 | 3072 | 8e-25 | 1813 - 1872 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.6 | 4042 | 8e-25 | 2783 - 2842 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.5 | 4913 | 8e-25 | 3654 - 3713 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.4 | 5502 | 8e-25 | 4243 - 4302 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.3 | 3805 | 8e-25 | 2546 - 2605 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.2 | 4530 | 8e-25 | 3271 - 3330 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38302.1 | 3223 | 8e-25 | 1964 - 2023 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC41965 | 402 | 3e-25 | 330 - 389 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_44332 | 402 | 3e-25 | 330 - 389 | 100 | 60 / 60 | plus |
Contig Sequence (402 bp)
>U35_44332 402 Hv_44K_v2 CAGATATTACGCGCCTACTCCAATGGGGCGATCGCCATGCTGTGACAAGGTTGGCCTGAA GAAAGGCCCATGGACTACGGAGGAGGACGAGAAGCTTCTTGCCCACATCGAGGAGCATGG ACACGGGAGCTGGCGTGCATTGCCCTCCAAGGCCGGTTTGCAGAGGTGCGGCAAGAGTTG CAGACTGAGATGGACCAACTACCTGCGGCCGGACATCAAGAGGGGCAAGTTCAGCCTGCA GGAAGAACAGACCATCATCCAGCTTCATGCTCTTCTTGGCAACAGGTGGTCTGCCATCGC GACACACCTGTCGAGGCGCACCGACAACGAGATCAAGAACTACTGGAACACCCACCTCAA GAAGAGGCTAGCCAAGATGGGGATCGACCCCGTCACCCACAA
Homology of Contig U35_44332 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os08g33660.1 | 358 | 1e-86 | protein|MYB family transcription factor, putative, expressed |
| Brachypodium v1_2 | Bradi3g36660.1 | 358 | 2e-87 | |
| Arabidopsis v10 | AT5G15310.1 | 326 | 6e-85 | | Symbols: ATMYB16, ATMIXTA, MYB16 | myb domain protein 16 | chr5:4974894-4976106 FORWARD LENGTH=326 |