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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29817_PI390587928Hv_44K_v2AGAAGAATTCCCACCTCAAGGACTTGCAAGCACTTGGCCCCTTGGAGATCATCCGTGCCC186GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37369613202e-24326 - 38510060 / 60plus ABC07827 ABC08213
MLOCMLOC_14817.14122e-2462 - 12110060 / 60minus None
MLOCMLOC_3356.137663e-212066 - 21259758 / 60minus ABC08212 ABC08213
MLOCMLOC_3356.235843e-211884 - 19439758 / 60minus ABC08212 ABC08213
MLOCMLOC_3356.630343e-212141 - 22009758 / 60minus ABC08212 ABC08213
MLOCMLOC_3356.337133e-212035 - 20949758 / 60minus ABC08212 ABC08213
MLOCMLOC_3356.433403e-211662 - 17219758 / 60minus ABC08212 ABC08213
MLOCMLOC_3356.89973e-21914 - 9739758 / 60minus ABC08213
MLOCMLOC_3355.117313e-21152 - 2119758 / 60minus None
JLOC1JLOC1_10123.14448e-25288 - 34710060 / 60plus
JLOC1JLOC1_2013.117382e-2185 - 1449758 / 60minus
JLOC1JLOC1_2014.837312e-211613 - 16729758 / 60plus
JLOC1JLOC1_2014.735812e-211838 - 18979758 / 60plus
JLOC1JLOC1_2014.640682e-211838 - 18979758 / 60plus
JLOC1JLOC1_2014.529862e-211302 - 13619758 / 60plus
JLOC1JLOC1_2014.432912e-211613 - 16729758 / 60plus
JLOC1JLOC1_2014.331162e-211398 - 14579758 / 60plus
JLOC1JLOC1_2014.233312e-211613 - 16729758 / 60plus
JLOC1JLOC1_2014.134202e-211302 - 13619758 / 60plus
Harvest21ABC493144323e-25187 - 24610060 / 60plus
Harvest35U35_478354323e-25187 - 24610060 / 60plus



Contig Sequence (432 bp)

>U35_47835 432 Hv_44K_v2
GGCGAATCATACTTGTCTTTTGCACGAGAGGTACGATCGAGTACTGGCCGGCGATGTCGT
CCGCTGAGGGAAGGAAGACGGCGTGCGTCACCGGAGGGAGCGGCTACATCGCCTCGGCGC
TCATCAAGCTGTTGCTCGAGAAAGGCTACGCTGTCAAGACCACGGTCAGAGACCCCGATG
ACACGGAGAAGAATTCCCACCTCAAGGACTTGCAAGCACTTGGCCCCTTGGAGATCATCC
GTGCCCGGCTGGATGAAGAAGGAAGCTTCGACGATGCAGTTTCCGGCTGCGACTACGCCT
TCCTCGTCGCCGCTCCGATGAACATCGGCTCAGCAGATCCCGAGAGGGATCTGATCGAGC
CGGCCGTGCAAGGAACACTCAACGTGATGAGATCGTGCGTGAGAGCCGGGACGGTGAAGC
GGGTGATCCTGA



Homology of Contig U35_47835 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os04g53800.13471e-63protein|leucoanthocyanidin reductase, putative, expressed
Brachypodium v1_2Bradi5g22830.13401e-73
Arabidopsis v10None