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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29639_PI390587928Hv_44K_v2ATTTAGGATAATGGGTCAGGGCCCATTACCGCTCGTGAATCGGATTTTCTTTCCTTTTTT750GeneList: brown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.7742.0611.0400.8750.3210.292
Raw 154.995269.435123.197168.88121.59920.973



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC171568403e-25752 - 81110060 / 60plusABC17156
Harvest35U35_225228393e-25751 - 81010060 / 60plus



Contig Sequence (839 bp)

>U35_22522 839 Hv_44K_v2
AGAAGAAAACGGTTCGGCCTCCTCCTTCCTCCCTCCCGTCCTCGAGCCCCCGACCCTTCT
CCCTCCACCCTCCGCCGCGGCAGCCCCCGACCCTTCTCCGAGATCCGGCCACCTCCGTCC
TCCGTACCCCCAGCACGCCTCCTCCGTCCACCGCCCGGTCGTACGCAGGCCGATCCGCCG
CCGCGTCACGACAGCGGGCCCCGCCGCAAGCGAGCAATGGACCGGGTCGGCAGCGGCGAG
AAGCACCTCGAGGACTGCACCGTCGCCAATGCCCTCGGAACTTGGGTCTTCTCTGTTGCT
GGTGCTCTCCTTGCCATTCCTGTGGGCATAAAGAGGAAGTCCTTCGCTCCGCTCGTGTTC
TTTGGCACTACTGGAACTATGCTTGACATCATCATGGGCATTAGCCAGTGTGAGAGGGAG
CATGCTGAGCGGCAGATGAAGCTTTTAGAAGCGCAGAACCTTGCAACAAATGCTTCAGTA
GAGGGTGAGAGCTTGACTGATTCATTTACCAATGTGGATAAGTGAAATGTGTCCTACTGT
GGGTTTTCTTTGATGAATTCCTGAGTTTAATAGTCATGATCCTTTGGAAACATTGTTGTT
CTTCCTATTTCCAAATAATATGTATTGAAGCAATGATCAGTGTTAGTAAAGATGACAATT
GAAAGGCCATCTAAATCCCTTATGTGTTCCTGGGGTCGATGACAGGTGATTATGTTGGAC
TAGCGATTTAATCGAGAATATTATGCAGATATTTAGGATAATGGGTCAGGGCCCATTACC
GCTCGTGAATCGGATTTTCTTTCCTTTTTTTCAAAAAAAAAAAAAAAAGAAAAAAAAAA



Homology of Contig U35_22522 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi4g07390.11033e-57
Arabidopsis v10None