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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29593_PI390587928Hv_44K_v2ACCGTCTGTAATTTCACCTAGGCTGCTCTCTTAGTTCTAGATTCTATTTAGCATAAAAAA541GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_38232.322239e-222087 - 214110055 / 55plus ABC25737
MLOCMLOC_38232.423129e-222176 - 223010055 / 55plus ABC25737
MLOCMLOC_38232.121919e-222005 - 205910055 / 55plus ABC25737
JLOC1JLOC1_24845.224175e-222211 - 226510055 / 55plus
JLOC1JLOC1_24845.122065e-222000 - 205410055 / 55plus
Harvest21ABC257376113e-2512 - 7110060 / 60minusABC25737
Harvest35U35_277766123e-25542 - 60110060 / 60plus



Contig Sequence (612 bp)

>U35_27776 612 Hv_44K_v2
GGAAAGCAGAACCAGCAGCTACATAGGTGCGTATGGCGGCCAGTGTCGTCCCATGGAGAT
GGTGAGGGAGACGGAGAAGACTTGGCCGTGCGCACAGCGCCAAAGGCCAAGCGTAACGGG
AACGGGATGCCGTCGGTTTGAAGAATGGATAAAGGCCTCGACTCCTGCGAGCACTGACGG
CAGTAGGCCTGGATCGGCGGCTGCCAGAGACGTCGTCGTCGGGCGGAGCAACTGCAGGCT
GTTTGGTTTCTCCCTGACTGATCAGAAGGCAGTGGGAGGAGCAGGTGGGGATGGTGGCGC
CAATGAAGGGAATTCGAACGATGAACAGGATTGCGCCGACCCGCGGGTGCTCGACTTGTT
CGGGCGCGGCCACCATGCTCCTAGCGCTATGCGTGCCATCGTTGCTGCTCCTCTGGGGAT
GTGATGTTGACGTTGATGTAGATGCTGCTGTGCTTTGCGGGCGGGAGTGCAATGGCCGTC
AAGGTCTGGTTCCTTCGGCTGCATTGTAGTGTCGGGCAATTCGTGCTCCCTGGTTAAAGA
AACCGTCTGTAATTTCACCTAGGCTGCTCTCTTAGTTCTAGATTCTATTTAGCATAAAAA
AAAAAAAAAAAA



Homology of Contig U35_27776 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None