- Probe CUST_29032_PI390587928
- Source Contig U35_29960
Probe Details
Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
---|---|---|---|---|
CUST_29032_PI390587928 | Hv_44K_v2 | CGAAGAATGTCGTGATCTGAACATGTTTTGTGGAATCTATCTATCATTAATAGTTTCGCT | 359 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
---|---|---|---|---|---|---|---|---|
MLOC | MLOC_65215.2 | 801 | 2e-24 | 689 - 748 | 100 | 60 / 60 | plus | ABC14638 ABC29565 |
MLOC | MLOC_65215.1 | 1154 | 2e-24 | 635 - 694 | 100 | 60 / 60 | plus | ABC14638 ABC29565 |
JLOC1 | JLOC1_42901.1 | 1060 | 8e-25 | 634 - 693 | 100 | 60 / 60 | plus | |
Harvest21 | ABC29565 | 437 | 3e-25 | 360 - 419 | 100 | 60 / 60 | plus | ABC29565 |
Harvest21 | ABC02033 | 752 | 3e-25 | 675 - 734 | 100 | 60 / 60 | plus | |
Harvest21 | ABC02032 | 840 | 3e-25 | 681 - 740 | 100 | 60 / 60 | plus | |
Harvest35 | U35_29960 | 437 | 3e-25 | 360 - 419 | 100 | 60 / 60 | plus | |
Harvest35 | U35_559 | 866 | 3e-25 | 703 - 762 | 100 | 60 / 60 | plus | |
Harvest35 | U35_558 | 742 | 3e-25 | 675 - 734 | 100 | 60 / 60 | plus |
Contig Sequence (437 bp)
>U35_29960 437 Hv_44K_v2 CTCCTCTCAGCGCCTCGCCTCCTCGCACCCGCATCCCCGCGCTCCGCCGCCGCCGCCGCC TCCGAGCCGCTCGAAGCCCACCTCGTAGCCATGGCGGAGCAGACCGAGAAGTCTTTCCTC AAGCAGCCAAAGGTTTTCCTCAGCACCAAGAAGGCTGACAAGGCAAAGAGGCCCGGCAAG GCTGGCAACCGCTTCTGGAAAAGTGTTGGCCTTGGTTTCAAGACCCCAAGGGAAGAAGGC TTTCATCGCTGCTTAAGCCCAGACTCTGATTCATGAGTAGTTCATAGTCAGAAGCTTTTC GCTCTTAAAACGTACCGGCCTGCTGTTTCAAGATTTGATTCCCGTGTTTTTTGTCAAACC GAAGAATGTCGTGATCTGAACATGTTTTGTGGAATCTATCTATCATTAATAGTTTCGCTT AAAAAAAAAAAAAAAAA
Homology of Contig U35_29960 to Model Species (E-value threshold 1e-50)
Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
---|---|---|---|---|
Rice v7 | None | |||
Brachypodium v1_2 | None | |||
Arabidopsis v10 | None |