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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_29000_PI390587928Hv_44K_v2AAGAGTATCCGTGGCAACAGCATAATTATTGTGGTAACATGATGCACCCATCTACGCTGA473GeneList: red
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.1141.4541.0920.8810.3720.403
Raw 73.375155.07998.392127.91418.33422.144



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_67498.552063e-214895 - 49549758 / 60plus None
MLOCMLOC_67498.652603e-214949 - 50089758 / 60plus None
MLOCMLOC_67498.359913e-215684 - 57439758 / 60plus None
MLOCMLOC_67498.453673e-215060 - 51199758 / 60plus None
Harvest21ABC295775423e-25474 - 53310060 / 60plus
Harvest35U35_299725423e-25474 - 53310060 / 60plus



Contig Sequence (542 bp)

>U35_29972 542 Hv_44K_v2
GCAGCCCAGGGTGGTGGTTTTGGAGGTGCAGCCCAGGGTGGTGGTTTTGGAGGTGCAGCC
CAGGGTGGTGGTTTTGGAGGTGCAGCTCAAGGAGGTGGCTTCGGAGGTGGTTTTGGAGCT
TTTGGCAGTAATAACCAAGGGGCTACTGGTTTCTCATCATTCGGTGGGGGTGGCGCTGCA
GGGCCTGGAAGACCCCCGGCGGATTTTTTGACACAAATGAGAAAATAGTGCAGTTTGTCT
CCAGGCATCCTCAAGTTCCAAACAGAAATGTTCAAATGGTTTTTGCCCCTGTATACATCA
AAAACTTCAAGTGACATGCTGAATGACAACATTTATGTGAAAGCTGATGTTGCTAAGATG
GAGCTCCAAAATTTGCCTGTCCTGTATTCAGTTACGGTGAGTTCAAGTCTGATTATCCCC
TGAGGCGTTTCATCAAGTACAGCACTACAGCCTCATTCATCATTCAAGAAAACAAGAGTA
TCCGTGGCAACAGCATAATTATTGTGGTAACATGATGCACCCATCTACGCTGATGCCGGA
CC



Homology of Contig U35_29972 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None