- Probe CUST_28523_PI390587928
- Source Contig U35_24055
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_28523_PI390587928 | Hv_44K_v2 | TGTGGGTAGCAGTATGCATGGAAAGGATGATTCTGGACAAGATGATGTATCTCCTGTCAC | 729 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK363795 | 3787 | 2e-24 | 2428 - 2487 | 100 | 60 / 60 | plus | ABC17486 |
| MLOC | MLOC_77511.2 | 3298 | 3e-21 | 1878 - 1937 | 97 | 58 / 60 | plus | ABC17486 |
| MLOC | MLOC_77511.5 | 3532 | 3e-21 | 2135 - 2194 | 97 | 58 / 60 | plus | ABC17486 |
| MLOC | MLOC_77511.3 | 3709 | 3e-21 | 2290 - 2349 | 97 | 58 / 60 | plus | ABC17486 |
| MLOC | MLOC_77511.4 | 3673 | 3e-21 | 2254 - 2313 | 97 | 58 / 60 | plus | ABC17486 |
| MLOC | MLOC_77511.1 | 3233 | 3e-21 | 1827 - 1886 | 97 | 58 / 60 | plus | ABC17486 |
| JLOC1 | JLOC1_51697.3 | 3504 | 2e-21 | 1961 - 2020 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_51697.2 | 3642 | 2e-21 | 2099 - 2158 | 97 | 58 / 60 | plus | |
| JLOC1 | JLOC1_51697.1 | 3390 | 2e-21 | 1847 - 1906 | 97 | 58 / 60 | plus | |
| Harvest21 | ABC20227 | 792 | 3e-25 | 730 - 789 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_24055 | 792 | 3e-25 | 730 - 789 | 100 | 60 / 60 | plus |
Contig Sequence (792 bp)
>U35_24055 792 Hv_44K_v2 AAGGACAGCAATCATTTGCACAATGAGCCCAGCCCGAAGCTACATGGAACAATCAAGAAA TACCCTGCTATTTGCAAGTTGCGCGAAGGAAGTAGTTACAAACGCACAGGTTAATGTAGT CATGTCTGATAAAGCCCTAGTTAAGCATTTACAAAGAGAACTTGCCAGGCTGGAGAGTGA ACTGCGATGTCCAGCTACCTATTCCAGTCTAGAAGCATTGGTGAAGGAAAAAGATAACCA CATCCGAAAGATGGAGAAAGAAATTAAGGAGTTGAAGGTACAGCGTGATCTGGCTCAGTC TAGGCTGCAGGATTTGCTCCAGGTTGTTGGAGATAACCATGTTTCAAAGCGCCCCCTGGC TTCTGGGAGGAACTTTACCTTCGATGTGCCCCACCCTTGTGAAGATCAGAGATCAACAAC CGAATCATCAGAAGTAGTCGACAATGTCCAAAATTGTAGGTTCCAAGGTCGCCGTGCAGC ACAAAAGGAAGTTGGGTCTCAACAGTCAGAAAATAATGTGCAGTTTGCTACCCCATTGAG TTATTCAGTCAGCAGTCCCCCGTTCAGTGGGATGCCCCCAACCACCAGCAGAGATGATGC TTCTCAGATATCAAATGAGGATTCAGATGATGTTTGCAAAGAAGTACGGTGTATAGAGAC CAATGAAACAGAAGGAAAACATGGTTTGGACTCGTCAGCCATCAGGAGCAATATCTTGCA AGATTCGAATGTGGGTAGCAGTATGCATGGAAAGGATGATTCTGGACAAGATGATGTATC TCCTGTCACCCT
Homology of Contig U35_24055 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | LOC_Os04g45580.1 | 946 | 2e-132 | protein|kinesin motor domain containing protein, expressed |
| Brachypodium v1_2 | Bradi5g17020.3 | 730 | 2e-149 | |
| Arabidopsis v10 | None |