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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2846_PI390587928Hv_44K_v2ATTGCTGACATCCTTCTGAAACGTGGAACACAAGTCAAATCTTTCTATGTAATAAACACC844GeneList: darkslateblue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 1.5981.9011.1650.7840.4260.513
Raw 277.024508.723273.778282.86254.41671.929



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC196819043e-25845 - 90410060 / 60plusABC19681
Harvest35U35_228169043e-25845 - 90410060 / 60plus



Contig Sequence (904 bp)

>U35_22816 904 Hv_44K_v2
GAGAGGGTGGTAATGCTGGCGGTGGCAGCAAGGTGCGCGTTAAGGTGCTAATGAAGAAAG
GGCACAAGCAACAGACGAAGCAGATGTTCGTCCCTGGCGACTGCTCTCTTGTACAGAGCA
CAAAGCAGCAAGAAGCTGCTGAGCTTGAGGAGAAGCAGAACATTAAGCGAAGGATCCTTG
AATACAACGAGAGGGAGGAAGAAGAAATGAATGGCGGATCGTCACAAATGGGGAACTGGG
GTCAAGGAGGGAGCAACACTGGCAGCAGTATTAGATCAGGTGGGCGGGGCAATTGGGATG
GCTGGATCAGGGGAGGCGCTCGGCGTCACCATGCTGCTGGTGGTTTCTACCAAGGATATG
GCAGGAGAAGATGAATGCCATAGTTGTCCCTGAGGTTTTTGACAGGGCAATGGTGTCAAA
CTCCTAACGGAGAAGAGGATGCCTTGAATTAGTTTGACAGGACGTAAACAGGATGATAGA
AAAGGCTTTTCACCTCTGAATACAAGTGGTGGGTCGACTATAGAGCCGGGCCCCACTTGA
CAATAAAACGACAATACCGCTGACGAAGGAGAAGAATGTCTGAAAGGGCGTTCTTCTGCT
GAAGTTGTTCAGTTGGGCTGATTTGTTAATGTGTACATAAAGATTTTCTTTTGTACTGGA
GGGACACCTTGCTTCAGCTGTAAACTTGGAGCGTGCATATCTACCTGAATGTAGATGTGG
TGTTGCTATTTGCAAATCTTCCACGTGCCAGAATTGTTGCTTGGATGCCATGCCAGTGTG
TTTGTATAAACCATAGACGAGAATAAACACCGATCATGCTCATTCTTCTGCCTTAGTGTG
CAACATTGCTGACATCCTTCTGAAACGTGGAACACAAGTCAAATCTTTCTATGTAATAAA
CACC



Homology of Contig U35_22816 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None