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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_28230_PI390587928Hv_44K_v2TTTCAACTGGGAGGCTCGTCGCCGTCTCATCAAGTTGTTCTTCAAGAACTTCTTCATCAT496GeneList: saddlebrown
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.2560.3521.0961.5801.1541.540
Raw 6.03913.61239.87887.81823.29933.545



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC390576553e-25497 - 55610060 / 60plus
Harvest35U35_429816553e-25497 - 55610060 / 60plus



Contig Sequence (655 bp)

>U35_42981 655 Hv_44K_v2
GCATGGTTCCCGGCCAGCCCATCATCGTCGCTGGTATCACCGGTGCCGTTCTCGCCAACG
TACACGCAGTCTGGACACACAAGGTAGTCGGCATGCCGACCGAGCAGAGCCTCTGGCAGC
GCATGCCCTCCAAGAGCCACTGGAAGACTCTCGCTGTCCCCGCCACCATCGCTTCCGTTA
TGCCATACATCAGCCTGTACCTCTCTTTCGGCGTAGCCATGCTCATGGGTCTTCACAAGC
TCGAGCAGGAGAAGATTAGCTCCTGCGCTGCGTGGACTGGTCTCGCCGTCCGCATCCTCA
CTCTCTTCGTCTTCGTCATCGTCTGCACCCTCTTCCTCTGCCTCCCCGCCATGGTCACCC
TGATCCGCATCGAAGCTTCCATCCTCCCTGAGGACCAGGACACCATCGTCCCCTTCGACC
GCACCTTTGGCGGCAAGGTCGTTAGCAAGATGATGGGTGGAACCGGTGTCGTTGGCTTCT
TGGATGCATGGAGGTCTTTCAACTGGGAGGCTCGTCGCCGTCTCATCAAGTTGTTCTTCA
AGAACTTCTTCATCATCGNTGGCATGTTCATTGTTCTTGCCCACGTTCTGGCTGCTGAGG
TCTTTGTTATCATGGGCCCGGCTGTCGGTAAGTTCATGGGTCATGTGAGGGAGGA



Homology of Contig U35_42981 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None