- Probe CUST_28051_PI390587928
- Source Contig U35_25021
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_28051_PI390587928 | Hv_44K_v2 | AAGGTATTGCAGGAAGTGTTGGAAGTATTGGATCTCACAGCGGTACAACTTCCACATCTG | 539 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | AK361217 | 2672 | 2e-24 | 1744 - 1803 | 100 | 60 / 60 | plus | ABC20328 |
| MLOC | MLOC_59606.14 | 2111 | 2e-24 | 1640 - 1699 | 100 | 60 / 60 | plus | None |
| MLOC | MLOC_59606.11 | 2099 | 2e-24 | 532 - 591 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.2 | 2390 | 2e-24 | 823 - 882 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.9 | 2095 | 2e-24 | 589 - 648 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.8 | 2099 | 2e-24 | 514 - 573 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.7 | 1052 | 2e-24 | 589 - 648 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.15 | 1758 | 2e-24 | 176 - 235 | 100 | 60 / 60 | minus | None |
| MLOC | MLOC_59606.4 | 927 | 2e-24 | 810 - 869 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.13 | 1823 | 2e-24 | 373 - 432 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.6 | 1241 | 2e-24 | 1124 - 1183 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.12 | 1825 | 2e-24 | 471 - 530 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.5 | 1831 | 2e-24 | 477 - 536 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.10 | 1326 | 2e-24 | 568 - 627 | 100 | 60 / 60 | minus | ABC20328 |
| MLOC | MLOC_59606.1 | 1575 | 2e-24 | 822 - 881 | 100 | 60 / 60 | minus | ABC20328 |
| JLOC1 | JLOC1_38804.6 | 2014 | 8e-25 | 1384 - 1443 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38804.5 | 2019 | 8e-25 | 1389 - 1448 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38804.4 | 2062 | 8e-25 | 1432 - 1491 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38804.3 | 2486 | 8e-25 | 1565 - 1624 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38804.2 | 2348 | 8e-25 | 1427 - 1486 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_38804.1 | 2353 | 8e-25 | 1432 - 1491 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC23715 | 603 | 3e-25 | 540 - 599 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_25021 | 603 | 3e-25 | 540 - 599 | 100 | 60 / 60 | plus |
Contig Sequence (603 bp)
>U35_25021 603 Hv_44K_v2 GAATACGACAGCTGATGGAGATGTGCATCCTGTTACCAGCTGGGGTGGAAACTATATCAA GGTCCTTTTTGAGAGAATGAAATATATTGCATTGAATATATTTCTTGAACATGTGCTCCG ACACAATGCAGTGCGTTACCATTAACTGCAATATTCCTTAAAACCTATATAAATTTTATG CAGCTATCATTCATCGCTACAGCTGATCTTTCAAGAATCCACCAATGGAGACGGAACAAA GTCTGGTCTGGTCTCTGAAATCACTGGCCTTATACATGCTGTATAGACCAACCTAGATGT AAAAGCAAAGCTATACAAGGATCATGCCCTTGGAATTCTGTTCTTAATGAATAACATTAA CTATATCGTCAGATCTATCCGCAGTTCAGAAGTCAAGGATTTAGTTGGTGATGATTGGGT TCAAAGACGTCGAAGGACTGTGCAGCAACATGCTACTCAGTACAAAAGAGCTGCTTGGGG AAAGGTATTGGAGTGTCTCTCAGCTCAAGGTTTAACTTCATCAGTAGGTTCAGCCATAGA AGGTATTGCAGGAAGTGTTGGAAGTATTGGATCTCACAGCGGTACAACTTCCACATCTGT GAT
Homology of Contig U35_25021 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |