- Probe CUST_28020_PI390587928
- Source Contig U35_37014
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_28020_PI390587928 | Hv_44K_v2 | ACGGATGTAGATGCAGTTGTTTACTTGATGCTGGTGAATGAGGGAGTTCACGCGCTTTAT | 106 | GeneList: lightyellow MasterList: Starch_synthesis_Function_Probe_Module |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.058 | 0.195 | 1.077 | 1.800 | 1.307 | 1.115 |
| Raw | 22.831 | 109.993 | 567.085 | 1434.084 | 382.875 | 351.652 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC32588 | 166 | 3e-25 | 107 - 166 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_37014 | 166 | 3e-25 | 107 - 166 | 100 | 60 / 60 | plus |
Contig Sequence (166 bp)
>U35_37014 166 Hv_44K_v2 TAAGTTCGATGGTTTCCGATTCGACGGCGCTTTCTCCATGAGGTATACCCACCATGGATT ACAAGTAACCTTTACAGGGAGCTACCATGAATATTTTGGCTTTGCCACGGATGTAGATGC AGTTGTTTACTTGATGCTGGTGAATGAGGGAGTTCACGCGCTTTAT
Homology of Contig U35_37014 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |