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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_28010_PI390587928Hv_44K_v2ATCCAAGGGTGCTGTTCATAATGGTGATGATAGTGCATCTAGTCGACAAAATGGTACAGC632GeneList: cyan
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.2711.5651.2250.7420.5850.438
Raw 211.484191.844156.013125.62540.89733.319



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK37199337703e-222039 - 20979859 / 60plus ABC09287
MLOCMLOC_55791.144163e-223163 - 32219859 / 60plus ABC09287
MLOCMLOC_55791.251943e-223128 - 31869859 / 60plus ABC09287
MLOCMLOC_55791.351913e-223128 - 31869859 / 60plus ABC09287
JLOC1JLOC1_36027.250951e-223156 - 32149859 / 60plus
JLOC1JLOC1_36027.150981e-223156 - 32149859 / 60plus
Harvest21ABC213386953e-25633 - 69210060 / 60plus
Harvest35U35_130686953e-25633 - 69210060 / 60plus



Contig Sequence (695 bp)

>U35_13068 695 Hv_44K_v2
AGGGTGCATATGTTGAAACATATGAGCAAGCTCAGACTCTTGTTGATTGTGATGACTTTG
ACGGCAAACTTTCACTAAGTGATGAGTACTCAAATGAGCAAGAGGAAGAGCTTAGGCATA
GAGTACAACTTGAAGCAGAGGAAAGAAAACTGGAGGAAACATTGGAGTACCAAAGGCGGA
TAGAGGAGGAGGCAAAGCAGAAGCATCTTGCCGAACAGTCCAGAAGTACTTCGTCAGCTC
CTGATATTGGGACAAATGGTTATTCAACTGATGTAAATTCAAGCGTGCATCAGGATAACC
ATCAAAGTGCACCCAATAATGTCTCACCTGCTTATCTTGAAGGGATAAAGTTTGGTGATT
TTCGCTTTCCTAAAGTTCCCTCGCGGGAAAAGAATTCTAGTTCCGATTTTTGTGGTGTGG
ACCTGCCACAAAAGACTGAGAACAATCGCAGGGAGAAACCAAATGGACTGTGCTCTCCTG
GAGCACATGCATTAACCAGCAACAATGTGGACTTCACTAAGCCAGCACTGAAAATGAACG
GAGTTGGGAAATATGCTCAGAATACAAAACTTGCAACTAATCCTCTCATCCAAAGGTCTA
AGAGCAGCACTAGCCAACCACATAAGAAATACATCCAAGGGTGCTGTTCATAATGGTGAT
GATAGTGCATCTAGTCGACAAAATGGTACAGCAGC



Homology of Contig U35_13068 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2Bradi1g74000.214149e-77
Arabidopsis v10None