- Probe CUST_27367_PI390587928
- Source Contig U35_11828
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_27367_PI390587928 | Hv_44K_v2 | ATGTTCCTGAAAGCCGAGCTTGAGAGCATTCATGCTTTCCTCAAGAAGATGTCCGAGTTT | 248 | GeneList: None MasterList: None |
Probe Values
This probe has no recorded values for this experimentProbe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| MLOC | MLOC_1443.7 | 5119 | 2e-24 | 2147 - 2206 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.8 | 2550 | 2e-24 | 1630 - 1689 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.4 | 5430 | 2e-24 | 2349 - 2408 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.2 | 4755 | 2e-24 | 1684 - 1743 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.5 | 1894 | 2e-24 | 865 - 924 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.3 | 3731 | 2e-24 | 782 - 841 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.9 | 4327 | 2e-24 | 1629 - 1688 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.10 | 3355 | 2e-24 | 2332 - 2391 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| MLOC | MLOC_1443.6 | 2414 | 2e-24 | 1493 - 1552 | 100 | 60 / 60 | plus | ABC14794 ABC18983 |
| JLOC1 | JLOC1_890.14 | 1765 | 8e-25 | 714 - 773 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.13 | 3817 | 8e-25 | 714 - 773 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.12 | 3534 | 8e-25 | 808 - 867 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.11 | 1868 | 8e-25 | 817 - 876 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.10 | 4303 | 8e-25 | 1570 - 1629 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.9 | 1749 | 8e-25 | 698 - 757 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.8 | 5428 | 8e-25 | 2325 - 2384 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.7 | 2673 | 8e-25 | 1622 - 1681 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.6 | 4355 | 8e-25 | 1622 - 1681 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.5 | 3376 | 8e-25 | 2325 - 2384 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.4 | 4350 | 8e-25 | 1624 - 1683 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.3 | 3894 | 8e-25 | 791 - 850 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.2 | 4633 | 8e-25 | 1628 - 1687 | 100 | 60 / 60 | plus | |
| JLOC1 | JLOC1_890.1 | 4959 | 8e-25 | 2331 - 2390 | 100 | 60 / 60 | plus | |
| Harvest21 | ABC22278 | 493 | 3e-25 | 249 - 308 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_11828 | 494 | 3e-25 | 249 - 308 | 100 | 60 / 60 | plus |
Contig Sequence (494 bp)
>U35_11828 494 Hv_44K_v2 GAATAAAGTAACTAGGGGAAGTTATCTGGAAATTCACACTTCCTTTCCTTCTTGACAACT TGACTGCTTTTGAAATGTGCTTTGTATGTCCTGTGCTTTTTATATGGGGCACAAAGACTT AAGCCAGAGGCAGGGTGATGGAGGCCACTGTATGTGCAACACATGGAGCCATGGTCTCTG TGTTACGGAAGTTGGGTGCTTTGCTCTCTGATGAATATAAACTTCTCACCAGTGTGAAGG GTGATATCATGTTCCTGAAAGCCGAGCTTGAGAGCATTCATGCTTTCCTCAAGAAGATGT CCGAGTTTGAGGACCCCGATGAGCTGTCCAAGTGCTGGATTAAGGCGGTGCGGGAGCTGT CCTACGACATCGAGGGCGGCATCGACAGTTTCATGCTGTCCCTGGGTGGCGAGTCCAGCC GCAAACCCCGTGGCTGCAAGGGACTCCTGAGCAGGTGCATGGATTTGATGAAACATTCCA AGGCACGCCATCGG
Homology of Contig U35_11828 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |