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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_27321_PI390587928Hv_44K_v2TTCGGTTCCATCTACATACTACTACTACTACTACAAAGGGTGTCTGAGGTCGTTGCGACT189GeneList: darkgrey
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 0.7400.7191.1602.2901.2021.165
Raw 6.17210.58916.29449.8899.3139.936



Probe Sequence's BLAST hits in Barley Unigene Datasets

This probe has no hits to the blast databases


DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence



Contig Sequence (598 bp)

>U35_2711 598 Hv_44K_v2
GTATCTCCCCACCTTTCCTCTCCGACGACGCATTAATTCATCGCTTTTCCGTCAGGCGGA
ACAAATTCCCGGAGGATTTCATTCGTAGACGGGCGGCTGTGATCACGACCTTCCGTTACG
GGCGGGAAATCATCGGGTGCTGGTTGATCGGGAAGCTCCTTCGATTCGGGGATCGGCTTC
TTCGCGGGATTCGGTTCCATCTACATACTACTACTACTACTACAAAGGGTGTCTGAGGTC
GTTGCGACTGGAGGAAGCGGGGAGCCATGGGGGCGGGGGTCTCGAGCTTTTTATTCGGCG
TTGGCGGCCCGGCGGCGGAGGCTGCGCCGGGTGCTGCGGGCCTGGGCGACCTGCCGGAGC
TCTGCGCCGCGCAGGTGCTGCTCCGGCTCGACGCGCCGGAGATCTGCCGCCTCGCGCGGC
TCAACCACGCGTTCCGCGGCGCCGCGGGGGCAGACTTCGTGTGGGAGGCCAAGCTGCCGG
AGAACTACCGCCACCTCATCGGGTACGTCGAGGGCGGGGGCGAGGAGGGCAGGCGCCGGC
GCCGCCGGGCCGGCACCAAGGAGATCTACGCCAGGCTCTCCAGGCCCGTCTCTTTCGA



Homology of Contig U35_2711 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None