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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_27256_PI390587928Hv_44K_v2TACTGAAGCTAGACTGCCTTGGCCCTTGATTCGATGATTCAATTTGTTTGTTTTTGTAAA14GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_38901.316469e-221545 - 16029857 / 58plus ABC43772
MLOCMLOC_38901.118969e-221686 - 17439857 / 58plus ABC43772
MLOCMLOC_38901.419729e-221730 - 17879857 / 58plus ABC43772
MLOCMLOC_38901.228549e-222644 - 27019857 / 58plus ABC43772
JLOC1JLOC1_25333.418655e-221611 - 16689857 / 58plus
JLOC1JLOC1_25333.319995e-221745 - 18029857 / 58plus
JLOC1JLOC1_25333.219325e-221678 - 17359857 / 58plus
JLOC1JLOC1_25333.118075e-221553 - 16109857 / 58plus
Harvest21ABC437724653e-2515 - 7410060 / 60minusABC43772
Harvest35U35_452194653e-2515 - 7410060 / 60minus



Contig Sequence (465 bp)

>U35_45219 465 Hv_44K_v2
TTTTTTTTTTTTTTTTTACAAAAACAAACAAATTGAATCATCGAATCAAGGGCCAAGGCA
GTCTAGCTTCAGTAGACATGGTATTCAATTACTGAAAGGAACACATCAAAAAGTTCGGTT
CCCTTTTCTCTCACTTCTACATAGTATTGCACTTCGGACCACCATCACCATCACCACCAA
TGGTAGTATGAATTAATTACTGAAGTGCTTTCAGTTCAACAAAAAGCACACACAATAAAT
CCGTTGATCAGGATAACAAGATAACCCAACACATAAATGTGATCACCTTCCCTTTGGATG
GCTGGTTGTTGAAATATCGCCAAAAAAATAACTCCGGTTGAATCTACAGGGGTCAATGAG
AACACAAAACTTGACCATCTGCCTTGGTGGCTGGGATATTAAAAACGCCAGCCGTTTCTC
TCTGGGTGAAACCATGTTGCACGAGATGATGACTGTATTTCCTGG



Homology of Contig U35_45219 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None