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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_27168_PI390587928Hv_44K_v2CGATTCAGTAACAGAAGCTGAGGAGCAAATAATTTTGTCCTTTATTTCCATGGTTTTGAA3GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCAK35580724493e-211117 - 11769758 / 60plus ABC19755 ABC43911
MLOCMLOC_33177.15653e-21309 - 3689758 / 60plus ABC19755 ABC43911
JLOC1JLOC1_21529.15572e-21300 - 3599758 / 60plus
Harvest21ABC439113543e-254 - 6310060 / 60minusABC43911
Harvest21ABC197554576e-22352 - 4119758 / 60plusABC19755
Harvest35U35_452593543e-254 - 6310060 / 60minus
Harvest35U35_246064596e-22354 - 4139758 / 60plus



Contig Sequence (354 bp)

>U35_45259 354 Hv_44K_v2
GAATTCAAAACCATGGAAATAAAGGACAAAATTATTTGCTCCTCAGCTTCTGTTACTGAA
TCGCGAACAAAAAAAAAAAACTCAACAGCGCCTTACAAAGTCGGCCACAACGGGGAGCTC
CTTGGCGGGGTTCTCGCAGTCGGGTTTGACCAAAAAGTAAACATGCCCGTCGGCATTGGT
CTCGTAAAACTCGAGCTCGCCGCCCCACCCGCACGCCTTGACCCTTGCCGCGTAGGCGCC
CGACCTTTCCACAAACCAACAGTTTTCCGCCGGGGCGACGAGCACACGGACCCCCCCGAG
CTGGCTCAACTCCTCCGGCAACCCGGGGGGGTTGATGTAGGGGTGGTCAAGGCC



Homology of Contig U35_45259 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None