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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_27069_PI390587928Hv_44K_v2AGGTTGCATTTTGGAACTGCCTTCCATTTGTAATATGAATGTTTTGGATGATATCCCCCC2417GeneList: None
MasterList: None



Probe Values

This probe has no recorded values for this experiment





Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
MLOCMLOC_71026.131523e-213067 - 31269758 / 60plus ABC08403
JLOC1JLOC1_47169.632142e-213080 - 31399758 / 60plus
JLOC1JLOC1_47169.529552e-212821 - 28809758 / 60plus
JLOC1JLOC1_47169.430212e-212887 - 29469758 / 60plus
JLOC1JLOC1_47169.332992e-213165 - 32249758 / 60plus
JLOC1JLOC1_47169.231952e-213061 - 31209758 / 60plus
JLOC1JLOC1_47169.131342e-213000 - 30599758 / 60plus
Harvest21ABC0840325053e-2529 - 8810060 / 60minusABC08403
Harvest35U35_1816925053e-252418 - 247710060 / 60plus



Contig Sequence (2505 bp)

>U35_18169 2505 Hv_44K_v2
GAAAGAGTACACTTCGTGATATAGTGTGGCATGATTAAAAGTTGAAGCTTGTTCCTGGCA
AATACTGACCTGTGTTTGTGCTAATAAATTTAGGATTCAGATATCAGTATCAATTTCTCG
AAGCACACATACTCAATTGCCAGCACATGGTATTTTTCCTCTCCATGTTCTGTTAGCTAG
ATCTAGTAAGGATGTTCCAGGTGAAGGGGTAAGCACCTTTTTAGTTCATGGAAGGTAGTG
TTATGTGTCTATCAGATGGTCTCTTTGCTTATTGGTAGCTTCACATTGCAGCATTCTCCA
ATGTATCGGTTCAGCCGGGCTTTTGTCCTGACTTCCTTCCGTGAATCTGGAGATAGTGAC
CACACTGAAGCCACATTCACCGTCCCCAATATGAAGAATTTGTCGACCTCCCAAGGTTCC
AGCGTCAACATTATCCTTGTTAGCTGTGGCCGAGGTGGACAGAATCTTGGTGAAAACTGC
TCAGAGAACCATACGGAGTATTCTTCTCCTCAAAAGCTTGGAGGCCAATGTTTCTGGGGT
AAAATACCAATTGATTCACTTGGTTCATCTCTGGATTGTCTAACTTTAAGCTTGGGGCGT
ACTGTGGAATTAACTTCAGAAATAAGTATGACCCCAGGTTTCATAGAGCCATCACTTCTT
GAGCATGGCAGTTGCTTGACATTTTGTTCTCTGAAGGCAGATGCTACAGGTTCATATAAA
CTAAAAGCAAGCATAGATGTACAAGAGGCAGGTGCAAGAGACATGCGTTTATCTCCTTAC
AATGCTTACTCATATGATGATGTCCCGCTTTCGTTATTACCAAAAATCTTAAGGTTAAGA
ACAGGCAATGTTCTCTTTAATTACAAGTACTACAAAAATTTGCACAAAAGCGAAGTTACA
GAAGGCTTTACTTGCCCTTTTTGCTTGGTACCGTGTGGAAGCTTCAAGGGTCTGGAATGC
CATTTAACCTCGTCGCATGACCTATTCCACTTCGAGTTCTGGGTATCTAAAGAGTACCAA
GCTGTTAATGTTAGTCTGAAGAGTGATGCCAAGAGAGGAGAGCTTCTGACTATCGCAGGA
AATGATCCAGGCAATAGAGTATTTTTCTACCGATCATCAAGGTTTAAAAGGTATAAAATA
TCAGAAACGCCAACTGAGAAGATCAAGGATGTACATCCACATATCACGGTACCAGGATCA
CCTGGAATGACCATGCCCGTGGACCAAGATATTGTGGAACTAAGATCACCACGAAATACG
GTTCCTGCACCTACACAAATGACTGAATCAAGATCGTCTGAAGATGCCCAGAAAGGGTCT
GAGGTGGATTATGTCCCAAAGGAAAATGGAATTAATGTACCAGAAGCTTCAATCGATCCT
CATCGACTATTACCTGGTAGAAATCATTCAGAACCAACAGCTCTACAGTCTGATAGGGCA
AGGAAGCTCCCGGTTGATCTAGATGACCCTAGTCTTGTACAGCTGAAAAAACGCGAGTTC
TTCCATTCTCAGAAGGCACAGAGAATGGAGATGGACGTACTTTACTCAGATCATGACAGT
GAAGACGAACTTGATCATGACATCGCTGACTTCGAAGATAGGACGCTGCTTAATGGTTTT
TCTGATGTTGCAAAAGAGGAAAAGCGTATCATGCATCTGTGGAATTCGTTTAAGCGGAGA
CAGAGGATATTAGCCGATGGCCATATACCTTGGGCGTGCGAGGCATTCACCCATCAGCAT
GGACAGGAACTCGTGCAGAACCCGAGACTACGATGGTGCTGGCGCGTACTGATGATCAAG
CTCTGGAACCACGGCCTGCTAAATGGCCGCACCATGAATATCTGCAACAAACATCTCGAG
AGCTTGGCAAGCCAAAGCGCCGACCCCAAGCGGTCGTGACTCGGTAGGAAACATTGGGCT
AGCTGAGCAGGGCTGGTCCAGCCGGCAATGCCCTTTTTTGGCAGTGCAGCATGATAACAC
TTTGATTTCTGGCGTCCTCGTCGAGGCTGCATCCGAGGACAAGACGGTCTCTTACATTGG
GGATTATTTTGGGTTGGGCCGAATCGGCAAATGTTGTTTTCTGTTTGGATTATTATTTTC
ATTTCTTATTGGTTTGTTTCATGCATTGCTTGAAACACCTATTAACATTGGGACCCGGCC
ACGTGGATTCGTGGGTGTATGCATGGAAACACAAACACAAAAGATTGGGGATATCTGTTG
TAGCTGGGATGGGTGTACGGGGACACAAAAGGTTGGGGATATCTGTTGTACCTGGGGGTT
CAAGCAATATAGAAATGTTGTGCATTTGTGACTGATGTGATGTTTTTGCCAGATCAGTGG
ATTAACGCATACTTTTTTACTGACTTGGGTTGATCTCTGAGCGAGTTAGGGGTGGGGTTG
TGTAATGTGGTTTCTCTAGGTTGCATTTTGGAACTGCCTTCCATTTGTAATATGAATGTT
TTGGATGATATCCCCCCCCCCTGAGACTAGTTACATCTTTGCAAT



Homology of Contig U35_18169 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7LOC_Os09g13630.16050.0protein|ZOS9-03 - C2H2 zinc finger protein, expressed
Brachypodium v1_2Bradi3g03106.16470.0
Arabidopsis v10AT5G51230.16311e-109| Symbols: EMF2, VEF2, CYR1, AtEMF2 | VEFS-Box of polycomb protein | chr5:20824153-20829344 FORWARD LENGTH=631