barSeed
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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_2705_PI390587928Hv_44K_v2GCAAGTTTTTCTCAATAATAAATTCACGCCTATTGCTAGCGGCCGCTACAGATCCTTATT806GeneList: bisque4
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.13910.0577.3420.6870.9010.802
Raw 16.696129.05078.2139.7202.8492.791



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest35U35_1422211183e-25807 - 86610060 / 60plus



Contig Sequence (1118 bp)

>U35_14222 1118 Hv_44K_v2
GTCTGTCCGGACACCGATGCCGCCATGCCATGTCTAGAAAGCAACAAAAGCAGCAGCAGC
AGTGGTGGAGTAGAGTAGTCCGCCACTTGAGCGCTTGGGGCTCTCAGCTCCACGCACCAG
ATGCCCCCTGCACCTGTGACATCATTATGAAATGCGGTGGAGCGGCCCCCGCGGTTCGCC
GGAGGCTGGACGGGGGCGTACGTGATCAACTCGTTCGTGGTGGCATGGGTGCTCGTCGTC
GGCTTCGGCTTCGGCGGATGGGCCAGCATCACCAACTTCGTGCAGCAGGTGTCCACCTTC
GGCCTCTTCGCCAAGTGCTACCAGTGCCCGCCCCACCCGGCCGTCGCCTCGCCGCTGCCA
CTCGCCCCGAGCCCGTCCATGCCGTTCGGCTTCAACATGACCGGCATGTTCGCCCCGATG
TCCGCCCCGTCTCCGTCTCCGGCGCCGGCACCAGCGCCGATGCATTTCGGGTCCCTTCAC
CACCACCACCGGCACCATCGCCACGGTCTCTAGTCGATCGGAAGGACGACGCGCACGACG
GATGGTTCGATAAACCGGCCGGAGCTCCATCTACCTAGTTTCTAGCTAGCTAGTTTAATC
AGCAGTGTTACTTGGATTAGCCCCTAGTAGTGAAATCTCTTGTGTTGTTGTGCCTCTCTT
GTTCTTCTTGTGCTGGTGGCAGCATGGCTTGCTATTAGTCGGCAGCTAGTGCGAGGTGGC
CTTAGCTGCTGCCCTGTGTGTGGAGCTGCTTTTCAGGCAGGAAGAAGAACTAATGTAACC
CGAAGGAGGGAGATGCTCCTGCTCCTGCAAGTTTTTCTCAATAATAAATTCACGCCTATT
GCTAGCGGCCGCTACAGATCCTTATTTTCAAGATGGATTACATACGTAGACCTATAGTAG
CGCATGCAACATACGTAGGCACAGTGCACGCGCTGGCCAATATTACAAACTTTGACAAAT
TAAAATGGATGGATCTGGAATTCTAGATTTAAAGCAAGTGAGCTTTAATCAGTCGATCTA
CCACCTTTCATAAGAGGAAAGACTGGGCGTGTTGCAATGCCACACTGCCCTGATGAATGC
TTTGTTCCCCTCTTCATTAGTATGTAGCCTTTGTCGCC



Homology of Contig U35_14222 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None