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Probe Details

Probe IDChipProbe Sequence (60 bp)Probe locationDifferentially Expressed
CUST_26927_PI390587928Hv_44K_v2AGCTGATACTCTGCATGTATGCACACAAACAATAATCCTATGAGACCGTCCATCAACTCT554GeneList: blue
MasterList: None



Probe Values

3 dpa4 dpa5 dpa6 dpa7 dpa8 dpa
Normalized 2.2621.5161.0400.8610.2990.264
Raw 111.868112.75271.35093.31111.46210.417



Probe Sequence's BLAST hits in Barley Unigene Datasets

DatasetHitHit LengthE-valuePosition on Hit% IdentityMatchDirectionProbes on Sequence
Harvest21ABC288946173e-25555 - 61410060 / 60plus
Harvest35U35_295616173e-25555 - 61410060 / 60plus



Contig Sequence (617 bp)

>U35_29561 617 Hv_44K_v2
TGAATCATGGACACCACCGGCGCCGCCGCCGCCGCCGCCGCCGGAGGCGGAGGCAGCGAG
GAGGAGGAGGACCGGGCCCGCCTGGCCGCCATCGCCGACAGACTCCAGGCCCGAGACTCG
GTCCGGCTGTACACCTGGCTCTCGCACCGGTGCTTCTCCGACTGCGTCACCACCTTCTAC
CGCAAGACGCTGGGCAAGCGCGAGGGGGACTGCGTCCGCGCCTGCGTCCGCAAGTACACG
CTCGCCACCAACGCCTCCGCCGCCCGCTTCAACAAGCTCGCCGACCCCTCCGCCGCCGCC
GCCGACGACGAGGACGGCTGATTCGTGCGACCCTGTGCTCCGATTTTTTGCCTGCTCTGG
GTACTTGCATCTAAAATGAAGGTCTAATTATCCAGGTTAAGTCGCTCCAGGTTCTTGTTG
CAGTCTCATCAACTCTCAGCGTCAGTATCCAGGACAGTATCATCACCAATTCACAGTAGT
CCGATGAGAGATTTTGTTATAAGCTTGATGATGTTCCTCGTCGTTGGCTTATCACTGTTG
AACAGAGACCTCTGAGCTGATACTCTGCATGTATGCACACAAACAATAATCCTATGAGAC
CGTCCATCAACTCTGAT



Homology of Contig U35_29561 to Model Species (E-value threshold 1e-50)

Pseudo-peptide datasetHitHit lengthE-valueDescription
Rice v7None
Brachypodium v1_2None
Arabidopsis v10None