- Probe CUST_26859_PI390587928
- Source Contig U35_43884
Probe Details
| Probe ID | Chip | Probe Sequence (60 bp) | Probe location | Differentially Expressed |
|---|---|---|---|---|
| CUST_26859_PI390587928 | Hv_44K_v2 | TAAATCGAGTGCTAAGCTCATTCTTGGTGATGACAGTCCTGCTATTCAAGAGAACAGAGT | 250 | GeneList: saddlebrown MasterList: None |
Probe Values
| 3 dpa | 4 dpa | 5 dpa | 6 dpa | 7 dpa | 8 dpa | |
|---|---|---|---|---|---|---|
| Normalized | 0.128 | 0.160 | 0.915 | 1.515 | 1.299 | 1.838 |
| Raw | 32.809 | 59.050 | 318.256 | 789.120 | 248.824 | 386.162 |
Probe Sequence's BLAST hits in Barley Unigene Datasets
| Dataset | Hit | Hit Length | E-value | Position on Hit | % Identity | Match | Direction | Probes on Sequence |
|---|---|---|---|---|---|---|---|---|
| Harvest21 | ABC41133 | 319 | 3e-25 | 251 - 310 | 100 | 60 / 60 | plus | |
| Harvest35 | U35_43884 | 319 | 3e-25 | 251 - 310 | 100 | 60 / 60 | plus |
Contig Sequence (319 bp)
>U35_43884 319 Hv_44K_v2 TCTTTCCAAACCCAATGGATTCTGTGTTTGCCTCCATTGTTCAAGCTCCTGAAGATCCCA TTCTTGGGGTGACAGTTGCTTATAACAAGGATCCAAGCCCAAACAAGTTGAATTTAGGTG TTGGTGCTTACAGAACTGAGGAAGGAAAACCTCTANTTCTAAATGTTGTTCGAAAAGCAG AACAGCTTCTTGTTAATGACCAGTCGAGAGTCAAGGAGTATCTTCCTATTCTTGGTCTCG CACAGTTCAATAAATCGAGTGCTAAGCTCATTCTTGGTGATGACAGTCCTGCTATTCAAG AGAACAGAGTGGCTACTGC
Homology of Contig U35_43884 to Model Species (E-value threshold 1e-50)
| Pseudo-peptide dataset | Hit | Hit length | E-value | Description |
|---|---|---|---|---|
| Rice v7 | None | |||
| Brachypodium v1_2 | None | |||
| Arabidopsis v10 | None |